| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1471 |
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| Symbol | |
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| ID | 4710044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1587967 |
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| End bp | 1589103 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855938 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001003040 |
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| Protein GI | 121998253 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA CGCTCGAGCT CGCCCGGGAG CTGATCCAGC GCCCGTCGGT AACTCCCGAG
GACGCCGGAT GCCAGACCCT CGTCGCCGAG CGCCTGGCCG CGGCCGGGTT CGGCGCCGAG
TGGCTGAACG CCGCCGGGGT CACCAACCTG TGGGCGCAGC GCGGCACCGA GCGCCCCCTG
TTCTGCTTTC TCGGCCACAC CGACGTGGTC CCCAGCGGTC CAGAGTCGGC CTGGCAACAC
CCGCCGTTCC AGCCCATCGT CGAGAACGGC TGTCTCTATG GCCGAGGCGC GGCCGACATG
AAGGGCAGTG TGGCGGCCTT CGTCGCTGCG GTGGAGCGCT TCGTCGCCCG CCACCCGGAC
CACGCGGGCG CCATCGCCGT GCTGCTGACC AGCGACGAGG AAGGCCCCGC GGTGGATGGC
ACCCGACGCG TGGTCGAGAC CCTGGCAGCG CGGGGGGCGG CCATCGACTA CTGCCTGGTG
GGCGAACCCA GCAGCCAGGC ACGGCTCGGC GACGAGTACA AGGTCGGCCG CCGCGGGTCC
CTAACGGGGC ACCTCACCGT GCACGGCGAA CAGGGGCACG TCGCCTACCC GCACCAGGCG
GACAATCCCA TCCACGCGTT CGCCCCGGCA CTCCAGGAGC TGGTCGCCAC CGAGTGGGAC
CAGGGCGATG CCGACTTCCC GCCGACGAGC TTCCAGATCT CCAACATCCA GGCGGGCACC
GGCGCCGACA ACGTCATCCC CGGAGCCATG GAGGTCGTGT TCAACCTGCG CTACGCCCCG
GCGGTCTCCG CCGAGGAGCT TCAGGAACGG ATCGAATCCA TCCTGCACCG TCACGGGGTG
CACCACACCC TGCACTGGCG GCACTCCGGC GCCCCCTTCG CCACCCGCGA GGGCGCACTC
ATCGATGCCG TTGAACAGGC AGTCACAGCG CACACCGGGC AGTGTCCACG ACGATCGACC
TCCGGCGGCA CCTCCGATGG CCGTTTCATG GGTCCGACCG GGGCGCAGGT GGTCGAGCTT
GGTCCGCTGA ACGCCACCAT CCACAAGGCC AACGAGCACG TCGCGGTCGC CGACCTGGAG
GCCCTGGAGG CGATCTACTT CGACATCCTG CAGCACCTGC TGGCCCCGGC CGACTGA
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| Protein sequence | MSATLELARE LIQRPSVTPE DAGCQTLVAE RLAAAGFGAE WLNAAGVTNL WAQRGTERPL
FCFLGHTDVV PSGPESAWQH PPFQPIVENG CLYGRGAADM KGSVAAFVAA VERFVARHPD
HAGAIAVLLT SDEEGPAVDG TRRVVETLAA RGAAIDYCLV GEPSSQARLG DEYKVGRRGS
LTGHLTVHGE QGHVAYPHQA DNPIHAFAPA LQELVATEWD QGDADFPPTS FQISNIQAGT
GADNVIPGAM EVVFNLRYAP AVSAEELQER IESILHRHGV HHTLHWRHSG APFATREGAL
IDAVEQAVTA HTGQCPRRST SGGTSDGRFM GPTGAQVVEL GPLNATIHKA NEHVAVADLE
ALEAIYFDIL QHLLAPAD
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