Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1465 |
Symbol | tsf |
ID | 4710660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1580565 |
End bp | 1581440 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639855932 |
Product | elongation factor Ts |
Protein accession | YP_001003034 |
Protein GI | 121998247 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.456181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGTAT CTGCAAACCT GGTCAAGCAG CTCCGTGAGC GCACCGGCTC CGGCATGATG GAGTGCAAGA AGGCGCTGGT GGAGGTGGAC GGTGACCTCG AGGCCGCCGC CGAGCTCATG CGCAAGAAGG GCCTGGCCAA GGCCGACAAG AAGGCCGATC GCGTCGCTGC CGAGGGCCGC GTCGTGGCGG CCCGTTCCGA AGACGGTAAG TCGGGCGTGC TTGTGGAGGT TAACTCCGAG ACCGACTTTG TCGGCAACGG GGACGAGTTC CGGGCCTTCG CCGAGTCCGT GGCCCAGCGC GCCCTGGATT CCAAGGTCGA GGACCTGGAC AGCCTGTTGG CTAGCGAGGT CGATGGCAAG TCGGTGGAGA CCCTGCGCCA GGAGATGGTC GCCCAACTTG GCGAGAACAT CGAGGTGCGC CGTTTCATCC GCTACGCTGG GGACCATCAG GTGGCTCAGT ACCTGCACGG TGCCCGGATC GGCGTTATGG TCGAGGTCCA GGGCGGCGAT GAACAGCTCG GGCGGGACCT GGCGATGCAC ATCGCGGCCT CCTCGCCGGT CTGCGTCAGC CCCGATGACG TGCCTGCGGA TCAGCTGTCC TCCGAGAAGG AAGTGCTGCT TGCGCAGGCC CGCGAGAGCG GCAAGCCGGA AGAGATCGTC GAGAAGATGG TCGAAGGCCG GCTCAAGAAA CACCTGAGCG AGATCACGCT GCTCGGCCAA CCCTTCGTCA AGGACCCGGA TCAGACGGTC GGGGACCTGC TCAAGGCCAA GGGCGCGGAA GTGACCCGTT TCGCGCGCTA CGAGGTCGGC GAAGGCAAGG AGAAGAAAGA CGAGAGCTTC GCTGACGAGG TGATGGCGCA AGTCCGCGAC TCCTGA
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Protein sequence | MSVSANLVKQ LRERTGSGMM ECKKALVEVD GDLEAAAELM RKKGLAKADK KADRVAAEGR VVAARSEDGK SGVLVEVNSE TDFVGNGDEF RAFAESVAQR ALDSKVEDLD SLLASEVDGK SVETLRQEMV AQLGENIEVR RFIRYAGDHQ VAQYLHGARI GVMVEVQGGD EQLGRDLAMH IAASSPVCVS PDDVPADQLS SEKEVLLAQA RESGKPEEIV EKMVEGRLKK HLSEITLLGQ PFVKDPDQTV GDLLKAKGAE VTRFARYEVG EGKEKKDESF ADEVMAQVRD S
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