Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1420 |
Symbol | |
ID | 4709251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1532769 |
End bp | 1534079 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639855887 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001002989 |
Protein GI | 121998202 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0719781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGCAG GAACAGAGGG CGTGCCGCGT TTCGAGCCCG CCCAGGCGGT GCGCATCCTC GCCTGGATGC GCATCACCGC CACCACGGGG CAGATGATCA CTGTCCTCTT CGTCCATTTC GGACTGGGCC TGACCCTGCC GCTGGTGCCG CTGCTGCTGA CGATCACCGC GCTGGCTGCA TGGAACGTCT TCGCCTTCTG GCGCCTGCGC AACACCCCCG AACAGATCTC CCAGCCCGAG GTCGTGTTCA ACGTCCTCAT CGATGTCGTA GCGCTCACCG TGCTCCTCGG GCTGACCGGC GGTCCCTCTA ACCCCTTCGT CTCGCTCTAC CTGGTGCCGG TGGCGCTGTC CGCCGTGGCC ATGCCGGCCA ACCTGGCCCT GGTCGTAGCA ATCCTCTGCC TTGTCCTCTA CGGGCTTCTG CTGGCGGTCT ATCTGCCGAT GGAGGGCCCG CACCCGATCA TCGGGGGCGA TTTCAACCTG CACATGATCG GCATGTGGGT GAACTTCGTG ATCTCCGCCT GGATGATCAC CGTGTTCGTC CGTTTCATGT CCTCGGTCCT GCGCCGGCAG GACTGGCGCC TGTCGAGGGC CCGGGAGCAT ACCCTGCGCA ACGAGCAGAT CGTGGCCCTC GGTACCGTGG CTGCGGGCGC GGCCCATCAA CTCGGGACGC CGCTTTCGAC CATGTCCATG GTCGTCGACG AGCTGCGCCA GGAACGTCGC GATGACACCG AGCTTCAGCA GGATCTTGAC CTGTTGCGCT CGCAGCTTGC GGTGTGCAAG GAAACCCTGG AAGATCTCAA GGACGCCGGG GCAGCTGGCA GTGATCAGGG GGGACGCACG GTCTCACTGC AGAAGCACGT GGCGCGTATC GTGGATACCT GGCGGCTGAT GCACCCGAAG ATCGAGCCCA GCGTGGAGTA TCAGCAGCCG TTCGTGGATG TCGAGATCAG CCAGGATCCG ACGCTCATGC ACGCCCTGCT CAATCTCCTG AACAACGCCG CCGAGGCGTC GCTGGAGAAT GGCTGCAGTG GGGTCGAGGT CTCGATCAGC AGCGACGGTG GCAAATTGAC CCTGGTGATC GATGACGAGG GCACGGGGCT CGACTCCGAG CGCGTGCGTA CCGCAGGTCG GGTGGTGCAG ACCACCAAGC CATCGGGCAT GGGGATCGGG CTGGTGCTTG CCAATGCGAC CGTGGACCGT TTCGGCGGCA GTGTCACCCT GATGGATTCA CCGAAGGGCC GGGGGGCACG AACGAAGATC GAGGTCTCCC TCGAACGGCT GCGCGCGGAC CACAACCGCG GCAGCGACTG A
|
Protein sequence | MAAGTEGVPR FEPAQAVRIL AWMRITATTG QMITVLFVHF GLGLTLPLVP LLLTITALAA WNVFAFWRLR NTPEQISQPE VVFNVLIDVV ALTVLLGLTG GPSNPFVSLY LVPVALSAVA MPANLALVVA ILCLVLYGLL LAVYLPMEGP HPIIGGDFNL HMIGMWVNFV ISAWMITVFV RFMSSVLRRQ DWRLSRAREH TLRNEQIVAL GTVAAGAAHQ LGTPLSTMSM VVDELRQERR DDTELQQDLD LLRSQLAVCK ETLEDLKDAG AAGSDQGGRT VSLQKHVARI VDTWRLMHPK IEPSVEYQQP FVDVEISQDP TLMHALLNLL NNAAEASLEN GCSGVEVSIS SDGGKLTLVI DDEGTGLDSE RVRTAGRVVQ TTKPSGMGIG LVLANATVDR FGGSVTLMDS PKGRGARTKI EVSLERLRAD HNRGSD
|
| |