| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1416 |
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| Symbol | |
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| ID | 4711108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1528364 |
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| End bp | 1530895 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639855883 |
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| Product | hypothetical protein |
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| Protein accession | YP_001002985 |
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| Protein GI | 121998198 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.675366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTCG CCCGGGCCGG ATGGCGTCAC CACCTGCGCC ACCCGTGGCA GGGGGCGCTG
GCGATCCTCG GGGTGGCGCT CGGGGTGGCG GTCGTGGTGG CCGTCGAGCT GGCCAACGCC
TCCTCGGAGC GGGCTTTTAC ACGGTCCGCC GAGGCCCTGG CCGGAGAGGC CACCCACCGG
ATCACCGCTG GGACCGCCGG CCTCGATGAG GCGCTTTATA CCGAACTCCG GCGCTCCGGT
ATTCGTCCCG CTACCCCGGT GGTGGAGGGG CACGTCTCCG GCCCGGACGG GCCGCTGCGC
GTGCTTGGCA TCGATCCCTG GGCCGAAGCC GGGGTGCGGG ACGCGGTGGC CGGCGCTGCG
CGCGCCGTTG ATGCCGGTGC GTGGCTCGAG CGGGACGATC TGGTGGTGCT CTTTCGCGAG
GATGCCGCGC GGTTAGGGGT GACCGACGGC GACACTGTGG CGGTGGAGAT CGGCGGGCGC
AGCCACCGGC TGGAGGTGGC CGCCGTCGCC GAGGCCCCGG ACCGACTCAC TGCCGAGGGG
CTTCGGGATA CCGTCGTGGT GGATGTGGCC ACCGCCCAGG AGCTCCTCGG CCGGGTCGGA
CGCCTCGATC GCATCGACCT GGTGATCCCC GGTGGGGTGG CCGGTGAGGC CCGGCTCGCC
CGCATCCAGG AGCTTCTGCC CAATGCCGCG GTGATCAGCG AGGCGCAGGA GGGGGCTGCC
GCCCTCGACG AGATGACCGC GGCGTTCCGT CTCAATCTGA CCGCCTTCAG CCTGCTGGCC
CTGCTCGTCG GGGCACTGCT CATCTACAAC GCCATCTCCT TCTCGGTGGT CCAGCGGCGG
GCACTGATCG GTCGCTTGCG GGCTCTCGGG GTGGGGCGCG GGCAGGTGTT CCGCTCGGTG
GTCGCCGAGG GAGCCGCACT CGGGGCCCTG GGTACACTCG TCGGCCTCCC GCTCGGCTAC
CTCCTGGCGG ATGGCCTGCT CGAACTCGTC ACCCGGACCA TCACCGATCT CTACTTCGTC
CTCAACGTTC GCGAGGTCGC GCTGGCGCCC TCTGCTTTGT TCATGGCTGC GGCGCTGGGG
CTGTTGGCCG CTGCGGTGGC GGCCGCAGCG CCGGCCTGGG AGGCTGCCTC CGTCGCGCCG
CGCACCGCCC TGGACCGGGC CTCACTGGAG GGGCGTGCAC GGCGTTGGGT CCGGCCCCTG
GCGGGGGGCG GGTTGCTGCT CGCTCTACTC GGGATCGGTC TCCTGTGGGG GGGTACCGGG
GGGCTGGTGG TGGGCTTCGG TGGGGTGTTT GCCCTGCTGG TGGGCGCTGC GCTGATGGTG
CCCTGGGCCG TCGGGGTGCT GGCCGGCGCG CTGGCCGGCC CGGCCGGCTG GATGCTCGGT
GCACCGGGCC GCATGGCCGC GCGTGGCGTC GGCGCCGGGC TTTCGCGCAG CGGGGTGGCG
GCGGTTGCGT TGGTGGTCGC GGTGACGGCG GTCATCGGGG TTAGCGTGAT GATTGACAGC
TTCCGCGGCA GTCTGGCGGC CTGGCTCGAT AGCACCCTGT CGGCCGATGT CTACGTCAGC
GCCCCGTCCC GGACCGGCGA ATCGCCCCCG ACGTTGCCCC CACAGCTCCG CGAGCGCCTC
GCCGCAGTCG CGGGCGTCGA GTCGGTGGCC ACGTCCCGCC AGTTGCGGGT GCCCTCGGAG
TACGGCGAGA TCCAGTTGCG CGCCTTCGAC CACGGGCCGA TCGGGGATGC CGGGATGGCC
TACAAGGCGC AGGCGCCTTC GGCCTGGACG CGTTTCCGGG ACGGTGAGGG GGCCTATATC
ACCGAGCCCT TTGCCGCACA CCATGGGCTC AAGCTCGGTG ACCGCATGGT GGTCCGGACC
CCGTCCGGCG AGCGAGTGTT GCCGGTGCTG GCCGTGGTTT ATGACTACAC CACCAGCCAG
GGGGCGGTGT TCGTCGCCCG CAGCTTCTAC GACGCGCACT GGGAGGACGA GGCCATCGAC
GGGCTGGCGG TCCACGCCGG GCCGGGGGTC GACCCCGACG CTCTGATCGC CGCGCTGCGC
GAGGCTGCCG GCGAGCAGGC CGACCTGCTC ACCTTCCGCT CCGATGCCGA GATCCGGCGT
CTTTCGCTGG ACGTGTTCGA CCGCACCTTC GCGGTGACCC GGGTCCTGCA GCTATTGGCC
GCCATCGTCG CCGCGGCCGG GGTGTTCGGC GCCCTGCTGG CGCTCTCTCT GGAGCGCAGC
AGTGAGGTGG CCGTGCTGCG CGCCCTGGGG TTGACCCCGG CCCAAGTGTG GACGCTGGAG
CTGGCCCGTA CCGGGCTGTT GGGCGTTTTC GCCGGGCTGC TGGCCATCGG ACCGGGGTTG
GCGCTGGCCC TGGCCCTGAC CGACGTGATC AATCAGCGCG CGTTCGGCTG GAGCCTGCAG
TTCCAGGCGG ACCCGCTGTT GCTGGGCCAG GCAGTTGCGT TGGCCACGGT GGCCGCCTTG
CTCGCCGGGC TCTATCCGGC CTACCGTGCG GCCCGAGTCC CGCCGGGGGA GGCGATGCGT
GAGGATGGCT GA
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| Protein sequence | MILARAGWRH HLRHPWQGAL AILGVALGVA VVVAVELANA SSERAFTRSA EALAGEATHR
ITAGTAGLDE ALYTELRRSG IRPATPVVEG HVSGPDGPLR VLGIDPWAEA GVRDAVAGAA
RAVDAGAWLE RDDLVVLFRE DAARLGVTDG DTVAVEIGGR SHRLEVAAVA EAPDRLTAEG
LRDTVVVDVA TAQELLGRVG RLDRIDLVIP GGVAGEARLA RIQELLPNAA VISEAQEGAA
ALDEMTAAFR LNLTAFSLLA LLVGALLIYN AISFSVVQRR ALIGRLRALG VGRGQVFRSV
VAEGAALGAL GTLVGLPLGY LLADGLLELV TRTITDLYFV LNVREVALAP SALFMAAALG
LLAAAVAAAA PAWEAASVAP RTALDRASLE GRARRWVRPL AGGGLLLALL GIGLLWGGTG
GLVVGFGGVF ALLVGAALMV PWAVGVLAGA LAGPAGWMLG APGRMAARGV GAGLSRSGVA
AVALVVAVTA VIGVSVMIDS FRGSLAAWLD STLSADVYVS APSRTGESPP TLPPQLRERL
AAVAGVESVA TSRQLRVPSE YGEIQLRAFD HGPIGDAGMA YKAQAPSAWT RFRDGEGAYI
TEPFAAHHGL KLGDRMVVRT PSGERVLPVL AVVYDYTTSQ GAVFVARSFY DAHWEDEAID
GLAVHAGPGV DPDALIAALR EAAGEQADLL TFRSDAEIRR LSLDVFDRTF AVTRVLQLLA
AIVAAAGVFG ALLALSLERS SEVAVLRALG LTPAQVWTLE LARTGLLGVF AGLLAIGPGL
ALALALTDVI NQRAFGWSLQ FQADPLLLGQ AVALATVAAL LAGLYPAYRA ARVPPGEAMR
EDG
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