Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1402 |
Symbol | |
ID | 4711146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1514973 |
End bp | 1516241 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639855869 |
Product | isocitrate lyase |
Protein accession | YP_001002971 |
Protein GI | 121998184 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAAAG ATCAAGCGGC GATTGAGCGT GACTGGGCGG AGAACCCGCG CTGGAAAGGG GTGCAGCGGG GCTACGGGGC CGATGAGGTC GTCCGTCTCC GGGGGACCGT GCACGTCGAG TACAGCCTGG CGCGCCAGGG TGCAGAGAAG CTGTGGCAGT CCATGCACGA GATGCCCTAC GTCAACGCCC TCGGCGCCCT GACCGGCAAC CAGGCCCTGC AGCAGGTCAA GGCCGGGCTC AACGCCATCT ACCTCTCGGG CTGGCAGGTG GCCGCCGACG CCAACCTCGG TCAGACCATG TATCCCGACC AGTCGCTCTA CCCGGCGAAC TCAGTCCCTG CGGTGGTCGA TCGCATCAAC AACGCGCTGC TGCGCGCCGA CGAGATCAAC CACGCCGAGG GCAACCCGCC GTTCGACTTC ATGAAGCCCA TCGTGGCGGA CGCCGAGGCC GGTTTCGGCG GCGTGCTGAA CGCCTTTGAG CTGATGAAGG GGATGATCCG CGCCGGTGCC GCGGGGGTCC ACTTCGAGGA TCAGCTGGCT TCGGTGAAGA AGTGCGGCCA CATGGGCGGC AAGGTGCTGC TGCCCACCCA GGAGGCGGTG CAGAAGCTCA TCGCTGCGCG CCTGGCGGCC GACACCATGG ATGTGCCGAC CATCCTGGTC GCCCGTACGG ACGCCGAGGC GGCAGACCTG CTGACCTCCG ACGTGGACGA CAACGACAAG CCGTTCATTA CCGGCGAGCG CACTGCGGAG GGCTTTTTCC GCACCAAGCC GGGCATCGAG CAGGCCATCA GCCGCGGCCT CGCCTACGCC CCTTACGCCG ACGTGATCTG GTGCGAGACC GGCAAGCCGG ATCTCGAATT CGCCCGCGAA TTCGCGCAGG CCATTCACGA GAAGTATCCC GGCAAGCTGC TCGCCTACAA CTGCTCGCCG TCGTTCAATT GGGCGGGCAA CCTGGACGAG GCCACCATCC GCAAGTTCCA GGATGAGCTC GGTAAGATGG GCTTCAAGTT CCAGTTCATC ACGCTGGCCG GCTTCCACTC GCTCAACTAC TCGATGTTCG AGCTGGCCCG CGGCTACAAG GAGCGGCAGA TGGAGGCGTA CTCCGAGCTG CAGCAGGCGG AGTTTGCCGC GGAGAAACAC GGTTACACCG CGACCCGTCA CCAGCGGGAG GTGGGCGCCG GCTACTTCGA CCAGGTCACC AACGTGATCC AGGGCGGCCA GTCCTCGGTG ACAGCGCTGA AGGGGTCGAC GGAGGAAGAG CAGTTCTAA
|
Protein sequence | MLKDQAAIER DWAENPRWKG VQRGYGADEV VRLRGTVHVE YSLARQGAEK LWQSMHEMPY VNALGALTGN QALQQVKAGL NAIYLSGWQV AADANLGQTM YPDQSLYPAN SVPAVVDRIN NALLRADEIN HAEGNPPFDF MKPIVADAEA GFGGVLNAFE LMKGMIRAGA AGVHFEDQLA SVKKCGHMGG KVLLPTQEAV QKLIAARLAA DTMDVPTILV ARTDAEAADL LTSDVDDNDK PFITGERTAE GFFRTKPGIE QAISRGLAYA PYADVIWCET GKPDLEFARE FAQAIHEKYP GKLLAYNCSP SFNWAGNLDE ATIRKFQDEL GKMGFKFQFI TLAGFHSLNY SMFELARGYK ERQMEAYSEL QQAEFAAEKH GYTATRHQRE VGAGYFDQVT NVIQGGQSSV TALKGSTEEE QF
|
| |