Gene Hhal_1391 details

Gene Information

• Locus tag: Hhal_1391
• ID: 4711221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1502243
• End bp: 1502923
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639855858
• Product: hypothetical protein
• Protein accession: YP_001002960
• Protein GI: 121998173
• COG category: [R] General function prediction only
• COG ID: [COG0670] Integral membrane protein, interacts with FtsH

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGAGC GCTATACCGA TAGTCGCGTC GCGACGGCTA CTGGCGGTGC CGCCACCCAG 
GCGCTGGCCA CCAACCGCCT GATCCGCAAC ACCTACATCC TGCTGTCGAT GACGCTGGCG 
TTCAGCGCGG TCACGGCCGG CATGGCCGTC CTCACCGACG CACCGCGGCT GAACATCTTC 
GTCGTCCTCG GCGGCTTCTT CGGCCTTCTG TTCCTGACCC AGTACCTTCG CAACAGCGTC 
TGGGGGCTGG CCTCGATCTT CGCCCTGACC GGGTTCATGG GTTATACCCT GGGGCCGATC 
ATCAACCTCT ACCTGGGGCT GCCCAACGGC GGGCAGACGG TGATGATGGC CTTTGGGGGC 
ACGGCGGCGA TCTTCGTCGG CCTGTCGGCC TACGCCCTGG CCACTCGGCG CGACTTCAGC 
TTCATGCGCG GCTTCCTCTT CGCCGGCATC CTGGTGGCCT TCGTCGCCGC CCTGGCCGCG 
TACTTCCTGC AGATGCCGGG CCTGTCGCTG GCGGTCAGCG TGATGTTCAT GATCCTGATG 
AGCGGGCTGA TCCTCTATCA GACCAGCGAG ATGGTAAACG GCGGCGAGGA CAACTACATC 
ATGGCCACCA TCACCCTCTA CGTGGCCATC TACAACCTCT TCACCAGCCT GCTGCACCTG 
CTTGGCCTGG CCAACGAGTA A 

 

Protein sequence

MSERYTDSRV ATATGGAATQ ALATNRLIRN TYILLSMTLA FSAVTAGMAV LTDAPRLNIF 
VVLGGFFGLL FLTQYLRNSV WGLASIFALT GFMGYTLGPI INLYLGLPNG GQTVMMAFGG 
TAAIFVGLSA YALATRRDFS FMRGFLFAGI LVAFVAALAA YFLQMPGLSL AVSVMFMILM 
SGLILYQTSE MVNGGEDNYI MATITLYVAI YNLFTSLLHL LGLANE