| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1374 |
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| Symbol | |
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| ID | 4711364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1481211 |
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| End bp | 1482821 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639855841 |
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| Product | nitrite reductase (cytochrome; ammonia-forming) |
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| Protein accession | YP_001002943 |
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| Protein GI | 121998156 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.661481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAGC GCACACGTCA ACTGAGGGCA GCCGTACTGG GTTTCACCCT GATCGGGATC
ATCGTCGGTC TCGCTTCCAC CGCTGCTTAC GATGGGGCGG ACGGCGCCAC CGCCGACGAG
GAGACCGCCA CGGATTCGCA CGACGCCCCT GACACGGATA CCTCCGCCGA CGACATCGAC
GAGTGGAGCC TCGGCATCGG CAACAGCGCC TTCCGCCACC TGCCGCAGTA CCGCTCCTAC
CAGAAGAACT GGGACGACAC GGTGATGACC GAGTACGGCG GCTCCGTGCC CCACCACAAG
CACGACGGCG AGAACCCTCT GCCCGAGGGC TACAAGCACG CCCAGCCGTA CCTGAAGAAC
CTGTGGCTAG GCTACCCGTT CTCGTGGCAC TACGAACGCG CCCGCGGGCA CACCTACGCC
GTCATCGACG TGACCACCAC CGACCGGATC AACCGCTACA GCGAGGAAGC AGACCTGCCG
GCGACCTGCT GGAACTGCAA GGGCAACTCC ATGCCACAGC TGCTGGAGGC CAAGGGCGAC
GATTTCTGGT CCTCGAACTT CCACGACTAC CGCAAGATCC ACGATCCGGC GGACCACGCC
ATCGGCTGCA CCAACTGCCA CGATCCCAAC GACGACATGC GGCTGAGGAT CACCAGCGTG
CCGCTGAAGG CGTACCTCGA TCGTCAGGGC AAGGACTGGC GCAACAAGTC TACCCAGGAG
ATGCGCTCCC TGGTCTGCGC CCAATGCCAC GTCGAGTACT ACTTCGAGGA CGGCGATCAC
GGCGTGGCCG CCAAGCCGCA CCTACCGTGG GACGAGGGCC TGGACCCGGG CGACATGTTC
GAGTTCAAGG AGGACGGCGA TCCGGAGCGC GACGGCTTCA AGGGGCAGTT CGTCGACTGG
GTGCACCCGG TCTCCGAGAC GCCGATGATC AAGGTCCAGC ACCCGGAGTT CGAGATGTAT
CAGGGCAGCG TCCACGCCGA GGCGGACGTC GCCTGCGCTG ACTGCCATAT GCCCCGGGTC
AGCAAAGGGC GCGCCGACAT CACCTCGCAC CACCTGACCT CGCCCTTGAG CAGCGAGGAG
ATGATCGAGA AGGCGTGCCA GAGCTGTCAT GAGGACCAAT CCCCGAGCTG GCTGCGCGAG
CGCACCGAAT ACCACCAGGA GCGGGTCTGG CGGCAGCTGA ACATCGCCCA GGAGAAGTCC
GTCCGCGCCC ACGAGGCCGT GCGCCTGGCC CGGGAGCTGG ACGATGAACA GGTGGACGGC
GCTCTGCTCG ACGAAGCCCG GCAGTTGATC CGCCGTGGCC AGTGGCACTG GGACTACGTC
TCGGCCGAGA ACAGCGCCGG CGCCCACAAC CCGAGCAAGG CCCTCGACAC CCTGGCCTCG
TCCCAGCAGT ACAGCGACCG CGCCGTGGAG CTGGCCCTGC GTGCCAGCGA CTACGCCATT
GCCCCGGATC TCTTCGCCGC CCCCATCGAG GAGCTGGTAC CGCCGATCAT GGAGCACAGC
CGGGCGCTCC AGATGGACGA GGAGCACCTC GCCTCGCACC CGTGGCTCGA GTACCTGGAA
CCGCTCCCGG AGGCGGAAAA GATCTGGGAA GGCAACGAGC GTCTGCGCTG A
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| Protein sequence | MGERTRQLRA AVLGFTLIGI IVGLASTAAY DGADGATADE ETATDSHDAP DTDTSADDID
EWSLGIGNSA FRHLPQYRSY QKNWDDTVMT EYGGSVPHHK HDGENPLPEG YKHAQPYLKN
LWLGYPFSWH YERARGHTYA VIDVTTTDRI NRYSEEADLP ATCWNCKGNS MPQLLEAKGD
DFWSSNFHDY RKIHDPADHA IGCTNCHDPN DDMRLRITSV PLKAYLDRQG KDWRNKSTQE
MRSLVCAQCH VEYYFEDGDH GVAAKPHLPW DEGLDPGDMF EFKEDGDPER DGFKGQFVDW
VHPVSETPMI KVQHPEFEMY QGSVHAEADV ACADCHMPRV SKGRADITSH HLTSPLSSEE
MIEKACQSCH EDQSPSWLRE RTEYHQERVW RQLNIAQEKS VRAHEAVRLA RELDDEQVDG
ALLDEARQLI RRGQWHWDYV SAENSAGAHN PSKALDTLAS SQQYSDRAVE LALRASDYAI
APDLFAAPIE ELVPPIMEHS RALQMDEEHL ASHPWLEYLE PLPEAEKIWE GNERLR
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