| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1362 |
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| Symbol | |
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| ID | 4711040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1471214 |
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| End bp | 1472956 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855829 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_001002931 |
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| Protein GI | 121998144 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCC CGTACCGCTG GCGCCTGGCC GCCGCGGCTG TTGCGCTGCT GATTGCAGCC
GGTGGCGTGC TGGCCATCGG GCAGGGGCTG CGCCTGGTCA TTGACCACGG GTTCGCCGAC
GGCGATCCGG CGATGCTCGA CCGCGCCCTG CTGGCTACGC TAGCGATGAT CCTGATCCTC
GCCCTGGCCT CCGCCACCCG CTATTACCTC ATCACCTGGA TCGGAGAACG CCTCGCTGCG
GATCTGCGCG GGCAGCTCTT CGATCGCCTG CTGCGTTTGG AGCCGGCGTT CTTCGAGCGC
ACCGGCGCCG GTGAGGTTCA GTCGCGGCTC ACCGCCGATA CCACGGTGCT GCAGAACCTG
TTCGGATCGG CGCTGTCGAT CGCCCTGCGC AACGCCCTGA CCCTGGTCGG TGCCCTGGTG
TTGCTGTTCG TTACCAGCCC GCGGCTGGCG ACGCTGGTGG TGGTGGGGAT CCCACTGATC
TTGATCCCCA TCTTCGGGTT CGGGCGGCGC GTGCGCAGCC TCTCCCGGGA TAGCCAGGAT
CGGGTTGCCG ATGTCGGGGG GTACGCTGGT GAGTCCCTCC ACGCCATCAG CACGGTCCAG
GCCTTCGGTC ACGAGGCCGA GGATCGGCGA CGCTATGCCG CCCGGGTCGA GGCGGCCTTC
GCCACGGCTA TCCGTCGCAC CTGGCAGCGG GCGTGGCTGA CGGGGGTCGC CCTTCTGTGC
GTCTTCGGCG CGGTGGGTGC TGTTCTCTGG CAGGGCGGCC ACGACGTCCT GGCCGGGCGG
ATGACGCCTG GCGAGCTGTC GGCCTTTGTC TTCTACGCGG TGCTGGCCGC CGGTTCGGTA
GCTGCCATGG CCGAGGTGGC TGGGGAGATC CTTCGCGCCA TGGGGGCCAC CGATCGCCTC
TTCGAGCTGA TCGATGCCGA ACCCAGGATC CGCGCGCCGA CCCATCCGCA ACCACTGCCC
CAGCCGGTTC GCGGAGAGGT GCGTTTCGAT GCTGTGACCT TCGCCTACCC GGCACGGGCC
GAGCAGCCGG CCCTGCGTGG GGTGACCCTG AGGGCTCGCC CCGGGGAGCG GGTGGCGCTG
GTAGGGCCTT CCGGGGCGGG CAAGAGCACG CTGCTGCAGT TGCTGCTGCG GTTCTACGAC
CCGGACGCCG GCAGTGTGCG GCTCGACGGC GTCGACCTGC GCGGGGTGGA TCCGGCCGAA
CTGCGCCGAT GCCTCGGGCT GGTGGCCCAG GAGCCAGTGC TCTTCACCGG GACGGCCGCC
GAGAACATTC GCTACGGCCG TCCCGAGGCC AGTGACACCG AGGTGCGGGC GGCGGCGCGC
GACGCCAACG CCCTCGGCTT CCTCGAGCAG CTGCCCCAGG GGCTGGAGAC GGAGCTCGGC
CCGGGTGGCG TCCAGCTCTC CGGGGGGCAG CGCCAGCGCG TGGCCATCGC ACGGGCCATC
CTGCGCGACC CAGCCGTGTT GCTGCTCGAC GAGGCCACTA GCGCGCTGGA TGCGGAAAGC
GAGCAGGCCG TTCAGCAGGC TCTGGAGTGC CTCATGGTCG GCCGGACGAC GCTGGTCATC
GCGCACCGGT TGGCTACGGT GGTGGCCGCT GATCGCATCG TGGTACTGGA TCAGGGGCGC
GTCGAGGCGC AGGGGACCCA TCGAGAGCTG CAGGCGCACA GTCCGCTGTA CCGGCGTTTC
TGTGCCCTGC AGCTGGGTGC TCTGGAGATC GAGACGCCTG GAAACGGGTC GCCCGTGTCA
TAA
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| Protein sequence | MLRPYRWRLA AAAVALLIAA GGVLAIGQGL RLVIDHGFAD GDPAMLDRAL LATLAMILIL
ALASATRYYL ITWIGERLAA DLRGQLFDRL LRLEPAFFER TGAGEVQSRL TADTTVLQNL
FGSALSIALR NALTLVGALV LLFVTSPRLA TLVVVGIPLI LIPIFGFGRR VRSLSRDSQD
RVADVGGYAG ESLHAISTVQ AFGHEAEDRR RYAARVEAAF ATAIRRTWQR AWLTGVALLC
VFGAVGAVLW QGGHDVLAGR MTPGELSAFV FYAVLAAGSV AAMAEVAGEI LRAMGATDRL
FELIDAEPRI RAPTHPQPLP QPVRGEVRFD AVTFAYPARA EQPALRGVTL RARPGERVAL
VGPSGAGKST LLQLLLRFYD PDAGSVRLDG VDLRGVDPAE LRRCLGLVAQ EPVLFTGTAA
ENIRYGRPEA SDTEVRAAAR DANALGFLEQ LPQGLETELG PGGVQLSGGQ RQRVAIARAI
LRDPAVLLLD EATSALDAES EQAVQQALEC LMVGRTTLVI AHRLATVVAA DRIVVLDQGR
VEAQGTHREL QAHSPLYRRF CALQLGALEI ETPGNGSPVS
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