Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1332 |
Symbol | |
ID | 4710886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1441060 |
End bp | 1443150 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639855799 |
Product | AsmA family protein |
Protein accession | YP_001002901 |
Protein GI | 121998114 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.176392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCGCC TGCTCAAGTG GCTCCTGCTG ATCCTCCTCG CCCTGATCGT GACCCTGGGC GTCGCCATCG CCGTGGTGGC TACGGTGATC GACCCCAACG ACTACCGCGA CGACCTGGCC GAACTCGCCG AGCGCGAGTT GGGCCGGGAG CTCGAGATCG AGGGCGAGAT CGAGTGGTCG TTCTTCCCCT GGCTGGGTAT CGAGATCGGA CGCGTCACCC TGGCCGACGC CGAGGGCTAC TACGACGAGC CGTTTGTCGA AATCGACCGG CTGTCGGCGG CGGTACAGGT CTGGCCCCTA CTGCGCGGCG AGCTGCATAC CCGCGCCGTC GAGCTCGAGC GCCCGATCGT ACGCCTGATG CGCGACGAGG ATGGCCGGGA CAACTGGGCG GACCTGGCCG AACGGTTCGC CGCCGCTGAG GACGAGCACG AAGACGACAC CGCGGCGCAG GAATCCGCGG ACTCCGAAAG CCCGGCGCAG GACAGCCCTG CCGATCTCGA GGCCCTCGGC GGGATCGTGA TTGGCGGACT GCGGCTGCAT GAAGGAGCCG TCTACTGGGA GGACCGCAGC GAAGACCGGC AGATCCAGCT GGACCCGCTG AACCTGGAGG TGGACACTCT GCGCCTGGAC GAGCCGGTGG GCGTGCGCGC CGACGTGCTC GTCGGCGACG AAGAGCGCGT GGCTTTCTCC GGCGAGGCCC GCCTGAGTCA GACCGACGCC GGCCCGGAGA TAGCAGCCAG CTGGACTCTG GATCCCCTCG ACCCCAAGGG CCTGCTCCAG GCCCTCGGTG AGGAGCCGCC CGAGACCACG GACCCCGAGG TCATGCGCAG CCTCAGCGGC TCCGGAACCA TCGATGCCAC GGCGGAGCGC ATCGACGTCA CGCGCCTCAT CCTCGACCTC GACGACAGCC GCGTCGAGGC TCAGGCGGCC ATCGAGCCTG AGCAGCCAAC CATCGAGTTC GCCGCACAGC TCGATCGGAT CGACCTCGAC GGCTATCTGC CGCCGGAGGC CGCCGAGGGA GAAGCCAATG GCAATGGCAA CGGCGAAACG GCCACTGCGA ACGATAACGG CGGACCGGAG GGCCTCGGCG ACCTGCGCGA GGTGGCGCTG GACTTTCCCC TGGAGCCGCT GCGGCCACTG ATCCTGGATG GCCGAGTTGG CATCGGCGAG CTCCGCGCCG CCGACCTGAC AGTCACCGAC TTCGAAGCCC TGCTGAGCGG TGCTGATGGG GAGCTCGGCG CCGAGTCCCT GCAAGCGCAC CTCTACGAGG GCGAGCTGGC CGGTCATGCG TGGCTCGACG CCCGCGATGA CGACCCCGCC TTCGATGTGG CCGCCTCGCT GGAGGGTGTG GCGTTCGCCC CGCTGCTCGA GGATCTGCTG GGCCGCGACT GGCTCCACGG CACGGGTCAG TTCCACTTCG AGGGCAGCGG CGGTGGCCCC CACCTCCACG GGCTGATCGA GGATTTCGAC GGCTCGGGGC ACATCGCCGC CGAAGACGGC AATCTGCTCG GCCTCAACAT TCCCCACAAG ATCCGCGAGG CCGCGGCGCA ACTGCGCCGG GAGGATTCCC CCGAGCCGCC CGGCGATGCG GAACGGACGG ACTTCTCCGA CCTGACCGCC AGCTTCACCC TCGAGGATGG CGTCGCCCGC AACGACGACC TGCTGCTCGA GTCCCCCCTG CTCGATGCCA CCGGGGAGGG CTCGGCGGAC ATCCTCGCCG AGGAGATCGA CTACCGGGTG CGGGCGACGT TCCCCGATGG GTTGTCGGAA GATGATGCGC CGCTCCTGTA TCACCTTGCC GGAGCCACGG TACCGCTGGA GATCTCCGGC TTCCTGTTCG ACCCGGACAT CCGACTCGAC CTCGCCGCTG CACTGGGTGA AGAGCGCCTG GAACGCCTCG GCGCGGCTCG CGAAGAGTTT GACGAGCGTG TGGACGAGGA GCGCGAGCGC CTGGAACAGA AGGCTCAGCA GGAACGGGAG CGCCTCGAAC AGGAGGCCAA GCAGGAACGG GAGCGGCTCG AACGAGAGGC TCAAGAGCAG CGGGACGACG CTGAACGGCG CCTCCGCGAG GAGCTGGAGA GTTTCTTCTA G
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Protein sequence | MLRLLKWLLL ILLALIVTLG VAIAVVATVI DPNDYRDDLA ELAERELGRE LEIEGEIEWS FFPWLGIEIG RVTLADAEGY YDEPFVEIDR LSAAVQVWPL LRGELHTRAV ELERPIVRLM RDEDGRDNWA DLAERFAAAE DEHEDDTAAQ ESADSESPAQ DSPADLEALG GIVIGGLRLH EGAVYWEDRS EDRQIQLDPL NLEVDTLRLD EPVGVRADVL VGDEERVAFS GEARLSQTDA GPEIAASWTL DPLDPKGLLQ ALGEEPPETT DPEVMRSLSG SGTIDATAER IDVTRLILDL DDSRVEAQAA IEPEQPTIEF AAQLDRIDLD GYLPPEAAEG EANGNGNGET ATANDNGGPE GLGDLREVAL DFPLEPLRPL ILDGRVGIGE LRAADLTVTD FEALLSGADG ELGAESLQAH LYEGELAGHA WLDARDDDPA FDVAASLEGV AFAPLLEDLL GRDWLHGTGQ FHFEGSGGGP HLHGLIEDFD GSGHIAAEDG NLLGLNIPHK IREAAAQLRR EDSPEPPGDA ERTDFSDLTA SFTLEDGVAR NDDLLLESPL LDATGEGSAD ILAEEIDYRV RATFPDGLSE DDAPLLYHLA GATVPLEISG FLFDPDIRLD LAAALGEERL ERLGAAREEF DERVDEERER LEQKAQQERE RLEQEAKQER ERLEREAQEQ RDDAERRLRE ELESFF
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