Gene Hhal_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1310 
Symbol 
ID4710818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand- 
Start bp1420396 
End bp1420998 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID639855777 
Producthypothetical protein 
Protein accessionYP_001002879 
Protein GI121998092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00821356 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTGTT CGCGATCGTT GATAAATTCA GGTGCGCTGC TTCTGTTCGC GCCAGCGGTC 
ACCCAAGCAG CGTTTGACCG AGACCCATTG AATTACGGCA AGATTGCACT GCACCAGTAT 
GCCAGCGCCA GCCCGGCTGG TGAGGATGTG GCGGGCTACA GCCTGGAGGT GTCGTCGATC 
TTTCACCCGG ATTTTATCGA CTTCAACCCC GATGTTCTGG CGATGATCGG GTGGGGCGCG 
TACAGCGACA CGGTGGACTA TCAGCGGTTT TCTGCACTAA TCGGAATTCC CTTTGAAAGC 
CCGGCGGCGA TTCGGTTCTC GCAGGCCTCG CGCGCCTACG TCGCCGGTGG ATTCGAGTAT 
CAGAACGCCG ACATCGGTAC AAATGACCGG GATACCGCAC CGACGGTTCG CATTGGAGTC 
CGAGAACGCC ATGGCTCGTT CGAGGTAGAC GTCCACGGTC GGCTCGTGGC TGGCGATTTC 
GATTACTGGG CCTCGGCGGC CGCTGTTCAC TACCCCGTAA CGGAGGGGTG GGATGTGTTC 
GGCGGCGCGG AGCTTTGGGA TGGTGATTTG GGGGGGGTCG CTGGTGCCTC AGCGAGGTTT 
TGA
 
Protein sequence
MRCSRSLINS GALLLFAPAV TQAAFDRDPL NYGKIALHQY ASASPAGEDV AGYSLEVSSI 
FHPDFIDFNP DVLAMIGWGA YSDTVDYQRF SALIGIPFES PAAIRFSQAS RAYVAGGFEY 
QNADIGTNDR DTAPTVRIGV RERHGSFEVD VHGRLVAGDF DYWASAAAVH YPVTEGWDVF 
GGAELWDGDL GGVAGASARF