| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1242 |
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| Symbol | |
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| ID | 4710474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1347159 |
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| End bp | 1349945 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855715 |
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| Product | ribonuclease |
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| Protein accession | YP_001002819 |
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| Protein GI | 121998032 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA TGCTGATCAA CGCAACTCAG CCGGAAGAGT TGCGCGTTGC ACTAGTGGAT
GGGCAGATCC TCTACGATCT CGACATCGAG GCACCCTCCC GCGAGCAGAA AAAAGCCAAC
ATCTACAAGG GGATCATCAC CCGGGTTGAA CCCAGCCTCG AGGCGGCGTT CGTCCAGTAC
GGCGCAGAGC GCCACGGCTT CCTCCCCTTC AAGGAGATCG CGCCGGCCTA CTTCACCTCG
GCGGACGGCC AGCGCAATTC CCCGAAGGAC GGCCTGCGCG AAAACCAGGA GGTCCTGGTG
CAGGTCGACA AAGAGGAGCG CGGCAACAAA GGCGCCGCCC TGACCACCTA CATCAGCCTG
GCCGGGCGCT ACCTGGTGCT CATGCCCAAC AATCCGCGTG CCGGGGGAGT TTCCCGGCGG
ATCGAGGGGT CGGATCGCGC GGAAATCCGC GAGAGCCTGC GCCAGCTGGA TGTCCCGGAA
GGGATGGGGC TGATCGTGCG CACCGCCGGC GTTGGACGTA GCACGGAAGA GCTGCAGTGG
GACCTGGATT ACCTGCTGAA GCTCTGGGAT GCCATCCAGA ACGCCACCGC AGAGCGCGCG
GCCCCGTTCC TGGTGTACCA GGAAAGCGAC GTCATCATCC GCGCGCTGCG TGATTACCTG
CGTTCGGATA TCGGCGAGAT CCTGGTCGAC GACGATGAAG TCTTCTCCAA GGCACGCGAC
TTCATCGACC AGGTCATGCC GTACAACCGG CAGAAACTCA AGCACTACAC CGATCCGGTA
CCGCTATTCT CGCGCTACCA GATCGAGAGC CAGATCGAGT CGGCGTTTCA ACGCGATGTT
CGCCTGCCCT CCGGCGGCGC CATCGCCATC GACCATACCG AAGCGCTGAT CTCCATCGAC
ATCAACTCCT CGCGCGCCAC CAAGGGTGCC GACATCGAGG AGACGGCCCT CAACACCAAC
CTCGAGGCCG CCGACGAAAT CGCCCGGCAA TTGCGTCTGC GCGACCTCGG CGGCCTGATC
GTCATCGACT TTATCGACAT GGGCCCACCC CGCCACCAGC GCGAGGTCGA GAGCCGGCTG
CGCGAGGCGG TCAAGGCTGA TCGCGCGCGG GTGCAGATCG GGCGGATCTC CCGGTTCGGG
CTGCTGGAGA TGTCTCGGCA GCGCCTGCGC TCGTCCCTCG GCGAGGCCCA CCAGGAGGTC
TGCGGCCGAT GCGGTGGCCA GGGGACGGTG CGCAGCGTCG AGTCCCTGGC GCTGTCGATC
CTGCGGATCA TCGAGGAAGA GGCGATGAAG GAGAAGACCG GGCGCGTCCT GGCACAGCTC
CCCATCGAGG TCGCCACCTT CCTGCTCAAC GAGAAGCGGG CCCAGATCGC CGAACTCGAG
CACCGCTACG GCGTGCACAT CCTGCTGATC CCCAACCGCA ATCTGGAGAC CCCGCACTAC
GATATTCAGC GCATGCGCAC CGACGAAGGC CCGGAGCAGA GCGGCAGTAG CTACAACCTG
GCCACTCCGG CAGCGGAGCC GACGGTCATC GAGGCTGGCC TGCCCGCCAG TCGCCCTCCG
GCGCCCGCCG TCCAGGGGGT TACCCCCAGT GCACCCGCTC CGGGCCCCGC CTCCGGCACC
GAGGAGCGAA AGCGACCGAC CGGCCAGGGC GCGGAGGGTC AAGGGGAAGA CGCCCCTCTG
AGCTCCATCT TCCGTCGGCT GCGCGGACTG CTATTCCAGA ACTCCACCGA TCAAGAACGC
CTTACGGAGG GCGATTCACC CCGTGACAAG GCGTCCCCTC GACGCGTTGA GGCTGAGCCG
GAGGCCTCCG AGGAGCGTGG CGGCCGCAAC GGCGGCCAGA GCAAGCGCGG CACCCGACGC
GGTGGCCGTT CCCGGGGTGG CGGACGCAGT CGGCGGGGCA CCGGCGACGG CGGCAACGGA
CAGCAGCAGC GCGCCCAGAC CGAGGGCGAC TCGGGCCCCC AAGGCTCGTC CGCCGAGACG
GCGCAAGCCC AGGATGAAGG CAAGGAGCGG AGCAACCGGG GCAGCAAGGC AAGCAGCAAG
CGCAAGAGCG AGAGCAGCGC CAAGGCCGGG ACCACTGCCG ACACCGAGAC CCCCGATACG
GAAACCGGGA CCCCGCAGCC GGAGGGCGCC AAGGAGTCGA CGCCGGAAGA CACCACCCAA
ACCTCCGAGG CCCGCTCCTC CAGTGGCTCC GGGAGAAGCG GACGCAGCCG TCGAGGCCGC
CGCGGGGGTC GCCGCCGCCG GCGATCCAAC AACGGGTCGG AGCAGGACGA CGGGCAGTCA
GGCTCGGCGG CTACCGCGCG TGACAGCGGC GACACGGCTG CTGAGTCCTC CGCCACTCAG
GATGCATCGG GCACTGCCTC AGCGGCTTCG GCAACTCGCG ACCAGGCGGC CGAAAAGCCC
TCTGAGCCGG GAACGCAGCC CGAGGCGGCG ACGACTCAGG GAGGCAGCAC CGAGGCGCGT
CGTACCAGCT CCCGCAAAGC CGCCGATCAA CGGGCGCAGC CGACCGACGA CGCGAAGCCG
CCGAAGGCGG CCGAGGAAGG CGCTGCCCCA TCGGTTAAGG ACGCCGACGC ATCGCGATCC
GACCAGGCAG AGGCGGCCGA ACCTGCCGCG GCAACCAACG CGCCACAACA GGCCGAGGAA
CCGGCAGAGA CATCCGGCCG CCGCAAGCAC GTCCGCTCAG GCCGTCCGCG CAAGCCGAAG
ACCCAGGCAT CTGGTGCGCA GAATGCCACG GCGCCTGACT CGGATGGCGC TTCGGTCAAT
GCGGAAGATG CGGAGAGGGC CGAGTAA
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| Protein sequence | MKRMLINATQ PEELRVALVD GQILYDLDIE APSREQKKAN IYKGIITRVE PSLEAAFVQY
GAERHGFLPF KEIAPAYFTS ADGQRNSPKD GLRENQEVLV QVDKEERGNK GAALTTYISL
AGRYLVLMPN NPRAGGVSRR IEGSDRAEIR ESLRQLDVPE GMGLIVRTAG VGRSTEELQW
DLDYLLKLWD AIQNATAERA APFLVYQESD VIIRALRDYL RSDIGEILVD DDEVFSKARD
FIDQVMPYNR QKLKHYTDPV PLFSRYQIES QIESAFQRDV RLPSGGAIAI DHTEALISID
INSSRATKGA DIEETALNTN LEAADEIARQ LRLRDLGGLI VIDFIDMGPP RHQREVESRL
REAVKADRAR VQIGRISRFG LLEMSRQRLR SSLGEAHQEV CGRCGGQGTV RSVESLALSI
LRIIEEEAMK EKTGRVLAQL PIEVATFLLN EKRAQIAELE HRYGVHILLI PNRNLETPHY
DIQRMRTDEG PEQSGSSYNL ATPAAEPTVI EAGLPASRPP APAVQGVTPS APAPGPASGT
EERKRPTGQG AEGQGEDAPL SSIFRRLRGL LFQNSTDQER LTEGDSPRDK ASPRRVEAEP
EASEERGGRN GGQSKRGTRR GGRSRGGGRS RRGTGDGGNG QQQRAQTEGD SGPQGSSAET
AQAQDEGKER SNRGSKASSK RKSESSAKAG TTADTETPDT ETGTPQPEGA KESTPEDTTQ
TSEARSSSGS GRSGRSRRGR RGGRRRRRSN NGSEQDDGQS GSAATARDSG DTAAESSATQ
DASGTASAAS ATRDQAAEKP SEPGTQPEAA TTQGGSTEAR RTSSRKAADQ RAQPTDDAKP
PKAAEEGAAP SVKDADASRS DQAEAAEPAA ATNAPQQAEE PAETSGRRKH VRSGRPRKPK
TQASGAQNAT APDSDGASVN AEDAERAE
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