| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1234 |
|---|
| Symbol | |
|---|
| ID | 4710456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1340308 |
|---|
| End bp | 1341261 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639855707 |
|---|
| Product | malonyl CoA-acyl carrier protein transacylase |
|---|
| Protein accession | YP_001002811 |
|---|
| Protein GI | 121998024 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0952866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC AAACCCCGGA ACTTGCGATG GCCTTTCCCG GCCAGGGTTC CCAGGCGGTC
GGGATGATGG CGCCGTGGCA AGATCACGAT ACTGTGCGCG CGACTTTTCG CGAGGCCTCC
GAGGCCCTGG GGTACGACCT CTGGGACCTC GTCGCCAATG GTCCCAGCGA AGAGCTCGAT
CGTACGGATC GCACCCAGCC GGCCATCCTG GTGGCCAGTG TGGCGCTGTG GCGTGTCTGG
CAGGAGCGCG ACGGCGCAGA GCCGGCGGTG CTGGCCGGGC ATAGCCTGGG TGAATACAGC
GCCCTGGTCG CCGCCGAGGC GCTGCAGCTG GGTGACGCCG CGGCACTGGT GGCTGAACGT
GGCCGCTACA TGCAAGAGGC CGTGCCGGCC GGCGAGGGCG CCATGGCGGC GATCATCGGC
CTGGACGACG ACCGGATTCG CGAGATCTGC GCAACCGCCG CCCAGGGTGC CGTGGTGCAG
CCCGTGAACT TCAATGCTCC GGGACAGGTG GTCATTGCGG GGAACCATGA GGCCGTTGAG
CGGGCCGGTT CCGCTGCGAA GGAGGCGGGC GCCAAGCGCG TTCTGCCGCT ACCGGTGAGC
GTACCGTCCC ACTGTAGCCT GATGCACCCG GCCGCTGAGC GCCTGGCGCA GCGCCTGGAA
GAGGTGGTCA TCAACGAGCC GCGCCGGCCG GTCATTCACA ATGTCGATGT CTCGGTGAGC
CGGGATGTCG CCTCCATTCG CCGCCGACTG GTCGAGCAGC TTGCCAGTCC CGTGCGCTGG
ACGGAGACGG TACAGAAGAT GAGCGCCGAT GGCGTCCAGG TCGTCGCTGA GTGTGGGCCT
GGCAAGGTCC TGACCGGATT GACGCGGCGC ATTGACCGCA GCCTTCAGGG GGGCACGCTT
AGCGAGCCCG AGGCCTTTGA CGACATGCTG CGCCGTTTCT CGGCGAGCAG CTAA
|
|---|
| Protein sequence | MSKQTPELAM AFPGQGSQAV GMMAPWQDHD TVRATFREAS EALGYDLWDL VANGPSEELD
RTDRTQPAIL VASVALWRVW QERDGAEPAV LAGHSLGEYS ALVAAEALQL GDAAALVAER
GRYMQEAVPA GEGAMAAIIG LDDDRIREIC ATAAQGAVVQ PVNFNAPGQV VIAGNHEAVE
RAGSAAKEAG AKRVLPLPVS VPSHCSLMHP AAERLAQRLE EVVINEPRRP VIHNVDVSVS
RDVASIRRRL VEQLASPVRW TETVQKMSAD GVQVVAECGP GKVLTGLTRR IDRSLQGGTL
SEPEAFDDML RRFSASS
|
|---|
| |