Gene Hhal_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1217 
Symbol 
ID4710407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1321402 
End bp1322817 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content65% 
IMG OID639855690 
Productglutamine synthetase, type I 
Protein accessionYP_001002794 
Protein GI121998007 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGTA CCGGAGAAGA TGTCCTCAAG CTGATCGAGG ACGAAGACGT CAAATTCGTC 
GACCTTCGCT TTACTGACAC CCGCGGCAAG GAGATGCACG TGACCTTGCC GGCCTCCCAG
GTCGACGAGG ATCTGTTCGA ACACGGCTCC ATGTTCGACG GCTCCTCGAT CCAGGGCTGG
AAGGGGATCC AGGAGTCGGA CATGATCATG CTCCCCGATC CCGACTCCGC CACCCTCGAC
CCCTTCTACG ATGAACCCAC CCTGAATCTG GTCTGCGACA TCCTCGAGCC GAGCACCCTG
CAGGGCTACG ACCGGGATCC GCGTTCGGTG GCCCGGCGCG CCGAGGCATA CCTGGCCTCC
ACCGGCGTGG GTGACACCGC CCTGTTCGGT CCCGAGCCGG AGTTCTTCGT CTTCGACGAC
GTCCGCTGGG GCGCCGACAT GAGCGGGACC TTCTACAAGA TCGACTCCGA AGAGGCCGGC
TGGAACTCCG AGCGGGTCTA CAAAGACGGC AACATCGGCC ACCGCCCCGG TGTGAAGGGC
GGCTACTTCC CGGTACCGCC GGTAGACTCG CTGCACGACA TCCGTGCCGC CATGTGCCAG
GCGATGGAGG AGATGGGCCT GGAGCCGGAG GTCCACCACC ACGAGGTGGC GACCGCTGGG
CAGTGCGAGA TCGGCGTGGC TGCTCGCACC CTGGTCAAGA AGGCCGACGA GCTGCAGACG
CTCAAGTACT GCGTGCACAA CGTCGCCCAC GCCTACGGCA AGACCGCCAC CTTCATGCCC
AAGCCGCTGG TGGGCGACAA CGGCAGCGGC ATGCACGTGC ACCAGTCGGT CTCCAAGGGC
GGTAACAACA TCTTCGCCGG GGACCAGTAC GGCGGGCTCT CCGAGGAGGC GCTCTACTAC
ATCGGCGGCA TCATCAAGCA CGCCAAGGCG ATCAACGCCT TCGCCAACGC CTCCACCAAC
AGCTACAAGC GCCTGGTGCC CGGCTTCGAG GCGCCGGTGC TGCTCGCCTA CTCGGCGCGC
AATCGCTCCG CCTCGGTGCG GGTGCCCTAT GTGGCCAACC CCAAGGCGCG GCGGATCGAG
GTCCGCTTCC CGGATCCCAC AGGCAACCCG TACCTGACCT TCGCCGCCAT GCTGATGGCC
GGTCTCGATG GCATCCGCAA CAAGATCCAC CCCGGCGAGG CGATGGACAA GGACCTCTAC
GACCTGCCGC CGGAGGAGGA GAAGGAGATC CCCAAGGTCG CCTTCCAGCT CGACGAGGCG
CTCGAGGCCC TGGACAACGA CCGCGAGTTC CTCAAGCAGG GCGGAGTCTT CTCCGACGAC
CTGATTGACG CGTACATCCA ATTGAAGATG GACGACGTCA CGCGCCTGCG CATGACCACC
CATCCGGTGG AGTTCGACAT GTACTACAGC GTCTAA
 
Protein sequence
MARTGEDVLK LIEDEDVKFV DLRFTDTRGK EMHVTLPASQ VDEDLFEHGS MFDGSSIQGW 
KGIQESDMIM LPDPDSATLD PFYDEPTLNL VCDILEPSTL QGYDRDPRSV ARRAEAYLAS
TGVGDTALFG PEPEFFVFDD VRWGADMSGT FYKIDSEEAG WNSERVYKDG NIGHRPGVKG
GYFPVPPVDS LHDIRAAMCQ AMEEMGLEPE VHHHEVATAG QCEIGVAART LVKKADELQT
LKYCVHNVAH AYGKTATFMP KPLVGDNGSG MHVHQSVSKG GNNIFAGDQY GGLSEEALYY
IGGIIKHAKA INAFANASTN SYKRLVPGFE APVLLAYSAR NRSASVRVPY VANPKARRIE
VRFPDPTGNP YLTFAAMLMA GLDGIRNKIH PGEAMDKDLY DLPPEEEKEI PKVAFQLDEA
LEALDNDREF LKQGGVFSDD LIDAYIQLKM DDVTRLRMTT HPVEFDMYYS V