| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1216 |
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| Symbol | |
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| ID | 4710406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1320166 |
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| End bp | 1321239 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855689 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001002793 |
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| Protein GI | 121998006 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATC ACGAGCGCGA CCCATCGCAG ATCCTCGAGG AGCTGACGAC CGCCGTCCTG
CTGGTGGATG ACCGGGTGCG TATCCTCCAC GTCAACCACG CCGCCGAGAC GCTGTTCCGG
GTCAGTAGCC GACAGGTGGT GGGCCAGACC CTGGGGACGG CACTGCGCGG GGCGGAACTG
CTCGAAGAGC TCATCCGCCA GACCCAGCGT ACCGGCGGGG CCTACACCCA GCGCGAACGT
CGCCTTCCGG TCCGCGGCGA TCGCCCGGTG ACCGTCGACT GCACCATCAC CCCGGTCTCC
GCCAAACGGG TGCTGATCGA GATCGCCGAG GTGGACCGTC ACGCCCGTAT TACCCGCGAA
CAGCACCTGC TGTCACAGAA TCGTGCCGTA CAGGAGCTGA TCCGCGGACT GGCCCACGAG
ATCAAGAACC CGCTCGGCGG CCTGCGCGGC GCGGCGCAGT TGCTGGAGGC CGAGCTCCCG
GAGCGCGACC AGCGCGAGTA CACCCAGGTC ATTATCCGCG AGGCGGACCG CCTGCAGCAG
CTGGTGGACG CCCTGCTCGG TCCCAATGCG CCGGCCCGTG AGGAGCCGGT CAACATCCAT
GAGGTCCTCG AGCGCGTCCG TTCGCTGGTC ATCGCCGAGG ATGCCGAAGG CCGCGCAGAG
GCGCCAGCGG TGGCGCTCCA GCGCGACTAC GATCCGAGCA TCCCGCCGGT CACCGCCGAG
CACAATCACC TGGTCCAGGC GGTGCTCAAC CTGGTGCGCA ACGCCCGTCA GGCCACCGGG
CCAGGGGGGA CCATCACCCT GCGTACGCGC ACCCAGCGTC AGTTCACCAT CGCCGACAAG
CCCCACCGCC TGGTGGCCCG CATCGACATC ATCGACGACG GGCCGGGGAT CCCCCTCGAT
CAGCAGGAGC AGATCTTCTA TCCGATGGTC ACCTCGCGCC CCGAGGGTAC CGGTTTGGGA
CTGCCCATTG CGCAGAGCCT GGTCAGCCGC CTCGGTGGCC TGATTGAGTG CGTCAGCGAA
CCGGGGCGCA CGGTGTTCAC CATCTGGTTA CCCATGGAGA CGGAAAATGA CTGA
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| Protein sequence | MEDHERDPSQ ILEELTTAVL LVDDRVRILH VNHAAETLFR VSSRQVVGQT LGTALRGAEL
LEELIRQTQR TGGAYTQRER RLPVRGDRPV TVDCTITPVS AKRVLIEIAE VDRHARITRE
QHLLSQNRAV QELIRGLAHE IKNPLGGLRG AAQLLEAELP ERDQREYTQV IIREADRLQQ
LVDALLGPNA PAREEPVNIH EVLERVRSLV IAEDAEGRAE APAVALQRDY DPSIPPVTAE
HNHLVQAVLN LVRNARQATG PGGTITLRTR TQRQFTIADK PHRLVARIDI IDDGPGIPLD
QQEQIFYPMV TSRPEGTGLG LPIAQSLVSR LGGLIECVSE PGRTVFTIWL PMETEND
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