| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1200 |
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| Symbol | |
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| ID | 4710366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1305277 |
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| End bp | 1306140 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855673 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001002777 |
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| Protein GI | 121997990 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0570214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTTTA CCAAGATGGA GGCGCTGGGC AACGACTTCG TCGTCCTCGA CGGCATCCGC
CAGCGCCTGC ACCTCACCCC CGAGACCATC CGCACCCTGG CCGACCGGCG GCGCGGGGTC
GGCTGTGACC AGCTGCTTAT CGCCGAGCCG CCTGCCCACA TCGCCGCTGA TGTCCGCTAC
CGGATCTTCA ACGCAGACGG CACCGAGGTG GAGCACTGCG GCAACGGTGT CCGCTGCCTG
GCCCGCTTCC TGGTTGACGA AGGGCTGGCC GCCCCGGGGG TCCTGCGCAT CGAGACCGAC
GGCCGCATCA CCGAGGCGGA ACCCCGGGAC GACGGCCAGG TCAGCGTCGA CATGGGCCCC
CCTGAACTCG AACCCGCGCG CATCCCCTTC CAGGCCCCAG TGCGACAGGA GGCCTACCGG
CTGGCCACCA GCCGCGGGGA GCAGACGATC GGCGCCGTCT CCATGGGCAA CCCGCACGCC
GTGTTGCGCG TCGACGACAT GACCGGGGCA CCGGTCGCTG AACTCGGCCC CGAAATCGAA
CGTCACCCGC GCTTTCCCCG GCGGGTCAAC GTCGGTTTCA TGGAAGTGTG CACCCGCGAC
CGCATCCGCC TGAGAGTCTT CGAACGCGGA GTCGGCGAGA CCCCCGCGTG CGGCACCGGG
GCGTGCGCCG CAGTGGTCGC CGGCCGGCTG CGCGACTGGC TCGACGCACC GGTGACTGTG
GAGCTGACCG GCGGCGTGCT CGTGATACAC TGGCTCGGTC CTGGGCGTTC GGTGTGGATG
ACCGGCCCGG CTCGCACCGT TTTCCGCGGC GAGATCGAGC TTCCCGCATC CGCCGCGGCG
ACGCCCCGGG GACCGACCCG CTAA
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| Protein sequence | MRFTKMEALG NDFVVLDGIR QRLHLTPETI RTLADRRRGV GCDQLLIAEP PAHIAADVRY
RIFNADGTEV EHCGNGVRCL ARFLVDEGLA APGVLRIETD GRITEAEPRD DGQVSVDMGP
PELEPARIPF QAPVRQEAYR LATSRGEQTI GAVSMGNPHA VLRVDDMTGA PVAELGPEIE
RHPRFPRRVN VGFMEVCTRD RIRLRVFERG VGETPACGTG ACAAVVAGRL RDWLDAPVTV
ELTGGVLVIH WLGPGRSVWM TGPARTVFRG EIELPASAAA TPRGPTR
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