Gene Hhal_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1180 
Symbol 
ID4710185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1285975 
End bp1286439 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content65% 
IMG OID639855653 
Producthypothetical protein 
Protein accessionYP_001002757 
Protein GI121997970 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCT GGGTGATGAA GTCCGAGCCC GATGTGTTCG GCATCGATGA TCTAGCCGCG 
GCGCCGCAGG GTACGGACCG ATGGGACGGG GTGCGTAACT ATCAGGTGCG CAACATGATC
CGCGACCACA TGCGCCCCGG CGATGCCGCC TTCTTCTACC ACTCCAATAC CCGTCCGCCG
GGGGTGGTCG GGGTGATGGA GGTGGTCAGT GGCCCCTACC CGGATCCTAC GGCCTTCGAT
CCGGACGACC TCCACTACGA TCCGAAGAGC ACCCCGGAGG CCCCACGCTG GTATTGCGTT
GATGTCCGTT TCCGCGAGCG CTTGCCGCGG CAGGTCACCC TGCAGGAACT GCGCGAGTGT
CCTGATCTGG AAGGTTTCCC GCTGATCCGG CGGGGCAACC GCCTGTCCAT CGTCCCGGTC
ACCGAGGCCC AATGGGCGGT CATTCGCCGA CTCGCTGAGG GCTGA
 
Protein sequence
MNRWVMKSEP DVFGIDDLAA APQGTDRWDG VRNYQVRNMI RDHMRPGDAA FFYHSNTRPP 
GVVGVMEVVS GPYPDPTAFD PDDLHYDPKS TPEAPRWYCV DVRFRERLPR QVTLQELREC
PDLEGFPLIR RGNRLSIVPV TEAQWAVIRR LAEG