| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1173 |
|---|
| Symbol | |
|---|
| ID | 4710269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1279842 |
|---|
| End bp | 1280780 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639855646 |
|---|
| Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| Protein accession | YP_001002750 |
|---|
| Protein GI | 121997963 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGGT CGATGACGCA AATGTCCCCG CGCCCGTCCT GGCCGACGAT CGTCTGGCAC
GCGATCCGGC CGCGCACGCT ACCGCTTTCC CTGTCCCCGA TCCTCGCGGG GTCCGCTGTG
GGGTGGGTAG AGAGCGGCGT CCTGCGCCTC GACGTGACCC TGGTGGCGGC GTTATCGACG
GCAGCGATCC AGATCGGGAC CAACCTGCAG AACGACGCCG CCGACACCCT GAACCAGACC
GACAGCGCCG AGCGCATCGG TCCGGTGCGG GTCACCGAGC GCGGTTGGCT GACTCCGCGG
CAGGTCATGG CGGCCGCCTA CGGTGCCTTC GCCCTGGCGC TGTTCTGTGG TCTCTACCTG
GTGGCGATCG GCGGCCTGCC CATTCTGGTG CTCGGCATCC TCTCGGTACT GGCCGGATAC
GCCTACTCCG GCGGCCCGTT CCCGATCTCC CGCGGTCCGC TGGGGGAGTT GTTTGTCATC
TTCTTCTTCG GGTTGGTCGC CGTCGGCGGT GTGGTCTACC TGTATACCGG GTCGATCAGT
CCACCCGCGC TGGTGATGGG AGTGACCCTC GGGCTGCCGG CCGCAGCCGT GCTGCTGGTC
AACAATCTGC GTGATCGCGA GGGCGACCGC GAGGCCGGGC GCGCGACGCT GGCCATCCTG
CTCGGACCGG TGGGTTCGGT CTGGTTGTTC GGTGGCCTGC TCGCCGGTGT GGCGCTGGGG
CTGCTCGGTA TGGTTGCGTT CGGCGTGCCG TGGACCGGCG CCGCCCTGGG GCTGGCTGTG
CTGCCCTTCG GGGTAAGGAT CTGGCGCGCG CTGATGGGCG CGGCCAGCGG CGAGGATTAC
AATCAGTGCC TGGCCCGCAC CGGGGTGTTC CAGCTGCTGC TCGCCCTGGT CGCCGGGGCC
GGGTTGGTGG TCGGGGCGTA TCTGCACGGG GCCGCGTAG
|
|---|
| Protein sequence | MDRSMTQMSP RPSWPTIVWH AIRPRTLPLS LSPILAGSAV GWVESGVLRL DVTLVAALST
AAIQIGTNLQ NDAADTLNQT DSAERIGPVR VTERGWLTPR QVMAAAYGAF ALALFCGLYL
VAIGGLPILV LGILSVLAGY AYSGGPFPIS RGPLGELFVI FFFGLVAVGG VVYLYTGSIS
PPALVMGVTL GLPAAAVLLV NNLRDREGDR EAGRATLAIL LGPVGSVWLF GGLLAGVALG
LLGMVAFGVP WTGAALGLAV LPFGVRIWRA LMGAASGEDY NQCLARTGVF QLLLALVAGA
GLVVGAYLHG AA
|
|---|
| |