| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1151 |
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| Symbol | |
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| ID | 4710141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1252134 |
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| End bp | 1255313 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855625 |
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| Product | hypothetical protein |
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| Protein accession | YP_001002729 |
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| Protein GI | 121997942 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.255903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA GTCGCGAAGC ACCCTTCCAA CAGGACATCA TCGACGAGCT GCGCGCCGCT
GGCTGGCTCG TCGGCGAGGC GGGCGGCTAC GACCGCACCC ACGCCCTGTA TCCTGAGGAT
CTGATTGGCT TCGTCCAGGA GGCCTACCCG GAGCGCTGGG AGAGGTTCAC CAAGAACAAC
CCGCAGCACC CCGAGCAGGC GCTGATCAAG GCGACCGTCC GGGAACTGGA GAAGCAGGGC
ACCCTCGATG TGCTGCGTCA CGGCTTCAAG GTCCCCGGCG TGCGCATCGC CACCTGCAGC
TTCCGGCCCG ACCACGGCAT GAACCCCGAG GCGCAGGCTC GCTACCGGGC CAACCGGCTG
CGCGTGGTCC CCGAGGTCTC CTACTCCCCC CACGCCCGCA CCGGAGAGTA CAACCCGCGG
CTCGATCTGG TGCTCTTCGT CAACGGCATC CCCACGGCGA CACTGGAGCT TAAGAGCGCC
TTCAAGCAGT CCGTTGAGCA GGCCAAGCGG CAGTACCGCA ACGATCGCCC CCCGAAGGAT
CCGGTCACCC GCAAGGAGGA GCCGCTGCTG AGCTTCAAGC GCGGCGCGCT GGTGCACTTC
GCCGTCAGTC AGAACGAGGT GGCCATGACC ACCCGCCTCG CCGGCGCCGA GACGACCTTC
CTCCCGTTCA ACCAGGGCAC ACCCGACGGC GGCGCCGGCA ACCCCCCGCC GCCCGACGCC
GACACCTACG CCACGAGCTA TCTCTGGCGC GAGGTCTTCC AGCCGGATGC CTGGCTGAAG
ATCATCGCCC GCTTCCTGCA CCTGGAGCGC AAGACCGAGG AAGAATTCGA CGGCAAGCGC
AAGACCCGGG AGAGTCTGAT CTTTCCCCGC TACCACCAGT GGGAGGCGGT CAATCGCCTG
CTGGCCGCCA CGGCCGAGGA GGGCGCGGGC CGGCGCTATC TAATCCAGCA CAGCGCCGGG
TCCGGCAAAT CCAACTCCAT CGCTTGGGTG GCCCACCAGC TGGCCGCGCT CTACGACGAC
GACGGCAACC GGTTGTTCAA CTCGGTGATC GTCGTCACCG ACCGCACCGT TCTCGACGAC
CAGCTCCAGC GCACGATCTA CCAGTTCGAG CACGCCCAGG GGGTCGTCCG ACCGATCACC
CGGGAGGTCG GTAACCAGAG CAAGTCCGAG CAGCTCGCCG AGGCCCTGGC CGAGCAGACG
CGGATCATCA TCGTCACCAT CCAGACCTTC CCGGCGCTTT TCGATGCCCT CGACGCCCGG
CCGCAGCTGG CCGAGGGGCG CTATGCGGTT ATCGCCGACG AGGCCCACTC CTCACAAAGC
GGCGCGGCAG CGAGCAAGCT CAAGACCATC CTCGGTGCCG ATGCCCCGGA GACCGACGAG
GTCAGCGCCG AGGAACTGCT CGATGCGGCG GTGGCAGCGC GCAAGCCCAC GGAGCGGATC
AGCTACTACG CCTTTACCGC CACGCCCAAG GGCAAGACCC TGGAGCTCTT CGGCCGGCCG
CCAGACCCGG AGCAAGGGCG GAGCAGCGAG AACCTGCCGC AGCCGTTCCA CGTATACTCC
ATGCGCCAGG CCATCGAGGA GGGATTCATC CTCGATGTGC TCAAGAACTA CACCACCTAC
CGCACCGCCT GGCGCCTGGC CCACCCGGAT GACCAGGCCT ATGAGGTCAA CTCGCGCAAG
GCCTCGGCCA AGCTCGCCCG GTGGGTGAAG CTCCACCCCT ACAACATCGG CCAGAAGGTG
GAGGTCATCG TCGAGCACTT CCGCACCCGG GTACGCCACC TGCTCAACGG CCAGGCGAAG
GCCATGGTGG TCACCGGCAG CCGGCAGGAG GCGGTGCGCT ACGCCCTGGC CCTGCGCCAA
CACGTGGAGG CGCAGGGTTA CAACGACGTG CACGCCCTGG TGGCCTTCTC CGGCAGCGTG
CCAGCGGATG ACACCATCCC CGAGGAGGTC ACCGAGCACA GCGCCCAGCT CAACCCCGGG
CTGAACGGCC GCGATCATGC CGAGGCGCTG GATACCGACG ATTACAACGT GATGATCGTC
GCCAACAAGT ACCAGACCGG CTTCGATCAG CCGAAGCTCT GCGCCATGTA CGTCGACAAG
AAGCTCCAGG GCGTGGACTG CGTGCAGACC CTCTCGCGGC TCAACCGGAT CTTCCCCGGC
AAGGAGACCT TCGTCCTCGA CTTCGTCAAC GACGCCGAGG AGATCCTCGC CGCCTTCCGG
CCCTACTACA ACAAGGCCGA GCTCGCCGAC GTCTCCGACG CCAACGTGGT CTTCGACCTG
CAGCGGACCC TGGATGCTGC CGGGGTCTAC CACTGGGAGG AGGTCGAGCA GTTCGCCCGC
GCCTTCTTCG ACCCCAAGGC CAAGAACGCG CAGCTCAGCA CTGCCTGTCA GCCGGCCAAG
GAGCGTTTTA CCCAGCGCTA TAAGGCGGCA CAGGAGCAGC GCCAGGCCTG GCAGGAGGCC
AAGCGCCAGG CCGAGCGCAA CGGGGACGAA GCGGGTGTCT CGCGGGCCGA ACACGAGATC
AAGGAGGCCG ACGAGGCCCT GGATGAGCTG GATCTCTTCC GCAAGAACCT GCAGAGCTTC
GTGCGCAGCT ACGAGTTCCT CTCGCAGATC GTCGACTACG ACGACGTGGA GCTTGAGCAG
CTCTGCGTCT ATGCCAAACA CCTCCACCCG CTGCTGCGCG TCGACCGGCT TGACGAGGAG
GCGATCGACC TCTCCGAACT GGCGCTGACC CACTACCGCC TGACCAAGCA CCAGGAGCAG
CGGCTGCAGC TTGAGGCCCG CGACGAGGCG GGGGATTACA ACCTCCAGCC GGTCAGCGAG
GTCGGCTCCG GCAAGCCGCA CGCCCCCGAG AAGAAACCCC TGGCGGAGAT CATCGAACGG
CTCAACGACC TCTTCGGCGC CGAGGTGGAC GAGCAGGACA AGCTCAACTT CGCCCAGGGC
GTGGCGGACC GGATCGAGCG CGACGAGGCG GTCATGGCCG AGGTCCAGCG CAACAACCCG
CAGCAGCTCA TGCACGGTCA ATTCCCCGAG CGGGTCGCCG ACATCGTGCT CGATGCCATG
CACGACCACG AGAAGCTGTC CATGGAGATC CTCGACGACA AGGAGAAGGG GCGCGACTTC
GCGCTGCTGA TCCTGCAGCT GCTGTCGATG CGGGGGGAGC CCGCGTCGCG GCGCGTGTGA
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| Protein sequence | MADSREAPFQ QDIIDELRAA GWLVGEAGGY DRTHALYPED LIGFVQEAYP ERWERFTKNN
PQHPEQALIK ATVRELEKQG TLDVLRHGFK VPGVRIATCS FRPDHGMNPE AQARYRANRL
RVVPEVSYSP HARTGEYNPR LDLVLFVNGI PTATLELKSA FKQSVEQAKR QYRNDRPPKD
PVTRKEEPLL SFKRGALVHF AVSQNEVAMT TRLAGAETTF LPFNQGTPDG GAGNPPPPDA
DTYATSYLWR EVFQPDAWLK IIARFLHLER KTEEEFDGKR KTRESLIFPR YHQWEAVNRL
LAATAEEGAG RRYLIQHSAG SGKSNSIAWV AHQLAALYDD DGNRLFNSVI VVTDRTVLDD
QLQRTIYQFE HAQGVVRPIT REVGNQSKSE QLAEALAEQT RIIIVTIQTF PALFDALDAR
PQLAEGRYAV IADEAHSSQS GAAASKLKTI LGADAPETDE VSAEELLDAA VAARKPTERI
SYYAFTATPK GKTLELFGRP PDPEQGRSSE NLPQPFHVYS MRQAIEEGFI LDVLKNYTTY
RTAWRLAHPD DQAYEVNSRK ASAKLARWVK LHPYNIGQKV EVIVEHFRTR VRHLLNGQAK
AMVVTGSRQE AVRYALALRQ HVEAQGYNDV HALVAFSGSV PADDTIPEEV TEHSAQLNPG
LNGRDHAEAL DTDDYNVMIV ANKYQTGFDQ PKLCAMYVDK KLQGVDCVQT LSRLNRIFPG
KETFVLDFVN DAEEILAAFR PYYNKAELAD VSDANVVFDL QRTLDAAGVY HWEEVEQFAR
AFFDPKAKNA QLSTACQPAK ERFTQRYKAA QEQRQAWQEA KRQAERNGDE AGVSRAEHEI
KEADEALDEL DLFRKNLQSF VRSYEFLSQI VDYDDVELEQ LCVYAKHLHP LLRVDRLDEE
AIDLSELALT HYRLTKHQEQ RLQLEARDEA GDYNLQPVSE VGSGKPHAPE KKPLAEIIER
LNDLFGAEVD EQDKLNFAQG VADRIERDEA VMAEVQRNNP QQLMHGQFPE RVADIVLDAM
HDHEKLSMEI LDDKEKGRDF ALLILQLLSM RGEPASRRV
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