| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1121 |
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| Symbol | |
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| ID | 4710081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1217408 |
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| End bp | 1219195 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639855593 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001002699 |
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| Protein GI | 121997912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACGC TCGACCAAGC CCTGATTGGC AACTGCGCGT TTGCCGCCCT GGTCAACCGC
CAGGCCGAGA TCACTTGGGC GTGCATGCCC CGCTTCGATG GCGATCCGGT CTTCTGCTCC
CTGCTCGGCG ATCCCGCGGC CGGTGCCGGC GCCGGGCGTT TCGCCGTCGA GCTGGAGGGG
CTGGCCCGCA CCGAGCAGTG GTATGTTCGC AATACCGCCA TCGTGGTGAC GCGGCTCTAC
GACCACCAGG GCGGGGTGGT GGAGGTGACC GATTTCGCCC CCCGCTTCGA GCAGTTCGGC
CGCACCTTTC GCCCGGTGGA GCTGATCCGT CAGGTCCGTC GGGTTGCCGG CTCACCCCTG
GTCTCTCTGG TGGTGCGGCC GGTGTTCGAT CACGGCCGGT CGTTGCCCAG CGTGACTCAG
GGCAGCAACC ACGTGCGCTA CGTCGGCCCG GGCCAGGTCC TGCGCCTGAC CACCGACGCC
TCGTTGACCG CGGTCCTGGA CGAGACCCCG TTCATCCTCG AGGACGACCT GACGCTGGCC
TTCGGTCCCG ACGAGACCCT GCTCCAGTCG GCCCGTGAGA CCGGCTACCA GTTCTATGAG
CACACCCTAA CCTATTGGCA GGAGTGGGTG CGCAACCTGG CCATCCCCTT TGAGTGGCAG
GAGGCGGTGA TCCGCGCGGC GATCACCCTC AAGCTCAACA CCTACGAGGA CACCGGTGCG
GTGATCGCCG CGGTGACCAC TTCGATCCCC GAGGCCCCGG ACACCGGCCG CAACTGGGAT
TACCGTTACT GTTGGCTGCG GGACGCCTAC TTCGTGATCA ACGCCCTCAA CCGCCTGGGG
GCGACCAAGA CGATGGAGCA CTACGTGCGC TTCATCATCA ACACCACTGC CCGCAACGAG
GGGCGGTCGC TGCGGCCGGT GTATCGCATC AACGGGCGTG ATGACCTTTA CGAGACCATC
GCCTACGGCT TGCCCGGATA CCGGGAGATG GGGCCGGTGC GCATCGGCAA CCAGGCCTAC
GAGCAGCAGC AGAACGATGT TTACGGGTCA GTGATCCTGG CCACCGCGCA CTTGTTCTTC
GACGAGCGGC TGCGCCGCCG CGGCGATGAA TCGCTGTTCC GCCGTCTCGA GCAGCTCGGT
GAGCAGGCCG TCGCCGTCTA CCGCGAGCCG GATGCTGGCC CCTGGGAGTT CCGCGGCTTT
GAAAAGGTGC ATACCTTCTC GGCGGCGATC TGTTGGGCGG CTGCCCGGAA CCTGCGTGCC
ATCGCCGCCA AGCTGGGGTT GATGGAGCGG GCTGATTACT GGCGCCGCCG GGCCGACGAG
ATGGCCGACA CCATCCGCAA CAGCGCCTGG AACGAGCAAC GCAACAGCTA CATGGCCAGT
TTCGGCGGCC AGGACCTCGA CGCCAGCCTG ATGCTGCTCT ACGAGTGGGG GTTCCTGCGT
GCCGGAGACC CGCGCCTGGC CGGGACCGTG CGCGCCGTCG AGCAGGAGCT GCGCCACGGC
GACTTCCTCT TCCGTTACGT CCACGAGGAC GATTTCGGCA AGCCCCACAC GGCCTTCACC
ACCTGTACCT TCTGGTACAT CGACGCCCTG GCGGCGGTGG GCCGTGAGGC CGAGGCCCGC
GCACTGTTCG AGCGCCTGCT CGAATGTCGC AACCACGTGG GTCTGCTCTC GGAGGATATC
GATCCGTACA CCGGAGAACT CTGGGGGAAC TTCCCGCAGA CCTACAGCAT GGTCGGTCTG
ATCAACTCCG CAATGCGCCT GAGTCGCAGT TGGGAGGAAC CGCTGTGA
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| Protein sequence | MSTLDQALIG NCAFAALVNR QAEITWACMP RFDGDPVFCS LLGDPAAGAG AGRFAVELEG
LARTEQWYVR NTAIVVTRLY DHQGGVVEVT DFAPRFEQFG RTFRPVELIR QVRRVAGSPL
VSLVVRPVFD HGRSLPSVTQ GSNHVRYVGP GQVLRLTTDA SLTAVLDETP FILEDDLTLA
FGPDETLLQS ARETGYQFYE HTLTYWQEWV RNLAIPFEWQ EAVIRAAITL KLNTYEDTGA
VIAAVTTSIP EAPDTGRNWD YRYCWLRDAY FVINALNRLG ATKTMEHYVR FIINTTARNE
GRSLRPVYRI NGRDDLYETI AYGLPGYREM GPVRIGNQAY EQQQNDVYGS VILATAHLFF
DERLRRRGDE SLFRRLEQLG EQAVAVYREP DAGPWEFRGF EKVHTFSAAI CWAAARNLRA
IAAKLGLMER ADYWRRRADE MADTIRNSAW NEQRNSYMAS FGGQDLDASL MLLYEWGFLR
AGDPRLAGTV RAVEQELRHG DFLFRYVHED DFGKPHTAFT TCTFWYIDAL AAVGREAEAR
ALFERLLECR NHVGLLSEDI DPYTGELWGN FPQTYSMVGL INSAMRLSRS WEEPL
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