Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1118 |
Symbol | |
ID | 4710068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1213741 |
End bp | 1215054 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639855590 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_001002696 |
Protein GI | 121997909 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCTT CCCGGATATC CCCGGACGAG GCGCATCGCC TCGAGGCCCT GGCGCGCTAC CAGGGAGGAG CGGATGGGCC CGAGGTGGCC TTTGAGCGCC TTGTCGGCCT GTGTGCGCGG ATCTTTGATG TGCCCATCGC CTTCATCTCG CTGATCGAGC GCGAGCGGCA ATGGTTCAAG GCAGCCCGCG GGCTGGGGAT CGAGGAGACG CCGCGCGAGA TCGCCTTTTG CAACTGCGTG ATCCAGACCG GGGACCCGCT GGTGGTCACC GATACCCATG CGGATCCGCG TTTCGCCGAC CACCCGCTGG TTACTGGGCC CCCGCACCTG CGTTTCTACG CCGGGGTGCC GTTGGTGGTT GAGGGTGGGG CGCGCATCGG CACCCTCTGC CTCGGCGACC GCCAGGCCCG CACCCTGTCC GACGCCGAGC TGGCGACCCT CCAGGAGCTG GCGGAGGTGG TGGTCGACGA GTTCGAGCTG CGCCGGGCCA ACCAGCGCCT CGATGAGGAG CGGGCGCGAG CCGAACGGTC CGCGATCGAG CTGCGCCGTA TCAACCTCGA GCTGCAGCAG GCCCGCGAGG AGGCCGAGCG CGGTAACCGG GCCAAGAGCC AGTTCCTGTC GAGCATGAGT CACGAGTTGC GGACACCGCT TAACGCGGTG CTCGGCTTTG CCCAGATCCT CGAGCAGGAT CCCCGCGAGC CGCTTTCCGA GCGCCAGGCC GGTTACGTCG ATCAGATCCT CGGGGGTGGC CGTCACCTGC TGTCGCTGAT CGATGACATC CTCGATCTTT CCCGCGTCGA GGCCGGTCGG GTGGAACTCA AGCCGGAGTG GGTGGCGCCG GGCCTGCTGG TCGACCAGTG TGCCGAGCTG CTCGGTCCGA TGGCCACCGA CGCCGGGGTG CACCTGTCCG TGTACGTGGC CGAGGCCGTT CCGGCATCCA TCTGGGTGGA TCCACGGCGC ATCCGCCAGG TGCTGTTCAA CCTCGCCAGC AATGCCGTCA AGTACAACCG GCCGGACGGG CGGGTGGAGG TCGAGGTCGA GGCCCCGGCG CCCGACCGGA TCCGCTTCCG GGTGCGGGAC ACCGGGATCG GTATCCGCGA GGAGCGCCAG CGCGAGGTCT TCTACCCCTT CAACCGCCTG GGTCTGGAGT CCTCGGAGGT GGAGGGGACC GGCATCGGTC TGGTGGTGAC CCGCCGCCTG GTGGAGCAGA TGGGCGGCGA GATCGGTTTC TCCAGCGCGC CCGGCGTGGG GTCGGTCTTC TGGGTCGATC TGCCCGGCGT GGTGACCGCG GACGAGGTCT CGAGCGATGG ATAG
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Protein sequence | MASSRISPDE AHRLEALARY QGGADGPEVA FERLVGLCAR IFDVPIAFIS LIERERQWFK AARGLGIEET PREIAFCNCV IQTGDPLVVT DTHADPRFAD HPLVTGPPHL RFYAGVPLVV EGGARIGTLC LGDRQARTLS DAELATLQEL AEVVVDEFEL RRANQRLDEE RARAERSAIE LRRINLELQQ AREEAERGNR AKSQFLSSMS HELRTPLNAV LGFAQILEQD PREPLSERQA GYVDQILGGG RHLLSLIDDI LDLSRVEAGR VELKPEWVAP GLLVDQCAEL LGPMATDAGV HLSVYVAEAV PASIWVDPRR IRQVLFNLAS NAVKYNRPDG RVEVEVEAPA PDRIRFRVRD TGIGIREERQ REVFYPFNRL GLESSEVEGT GIGLVVTRRL VEQMGGEIGF SSAPGVGSVF WVDLPGVVTA DEVSSDG
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