Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1106 |
Symbol | glgC |
ID | 4709912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 1201335 |
End bp | 1202600 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639855578 |
Product | glucose-1-phosphate adenylyltransferase |
Protein accession | YP_001002684 |
Protein GI | 121997897 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0448] ADP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.495993 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACCCC AGCGCTCCCC CCGTTTCGTC AGCCGCCTGA CCCGCGACAC CCTGGCCCTC ATCCTCGCCG GCGGCCGCGG CACGCGGCTC CACGAGCTGA CCCAGTGGCG CGCCAAACCG GCCGTGCCCT TCGGCGGCAA GTTCCGCATC ATCGACTTCC CCCTGTCCAA TTGCATCAAT TCCGGCGTGC GGCGGATCGG CGTCCTGACC CAGTACAAGG CCCACTCGTT GATCCGCCAC ATCCGCCAGG GCTGGAGCTC TCTCTCCAGC GACTTCGGCG AGTTCATCGA GCTGCTACCC GCCCAGCAGC GCATCGCCGA CTCCTGGTAC CTGGGCACAG CCGATGCGGT GTACCAGAGC CTGGACATCG TCCGGCTGCA CGACCCCGAC TACGTCCTCA TCCTCGCCGG TGACCACATC TACAAGATGG ACTATGGGCC GCTGCTTGCC TACCACGTCG AGCGCGGTGC GGATGTCACG GTCAGCTGCC TGGAGGTGGC GATCGAGGAG GCCACCGCCT TCGGGGTCAT GGCCATCGAC GAAGAAAACC GGGTGGTCCG CTTCGACGAG AAGCCGGCCC AGCCTGCACC AATCCCCGGC CGTGCGGATC GGGCGCTGGC CTCGATGGGG GTCTACGTCT TCAATCGGGA CTTCCTCTTT CGGACCCTCG GGGCCGACGC CCGCACCAGC TCGGAGCACG ACTTCGGCAA GGACATCATC CCGCAGCTGA TCGACCAGGC CCGGGTGGTG GCCTACCCGT TCCGCGATCT GAGCACCGGA GAGCAGGCCT ACTGGCGGGA TGTGGGAACC ATCGACGCCT TCTGGAAGAC CAATCTCGAG CTGATCGACG TCACCCCGGA ACTCAACCTC TACGACCGCG AGTGGCCCAT CTGGACCTTC CAGGAGCAAC TACCCCCGGC CAAATTCGTC TTCGACGAAG AGGACCGCCG CGGGACGGTG GTCGATTCCA TGGTCTCCGG GGGGTGCATC ATCTCGGGGG CGCAACTGCG CCGCTCGCTG CTCTTCTCCT CGGTGATTGT CGACGAGCGC ACCCGGGTCG AGGACTCGGT CATCCTCCCC GAAGCCCACA TCGGCCCGGG CTGTCGCATC CGCAACGCGG TGATCGACAA GTACTGCCAC ATCGAGGCGG GCACGGTCAT CGGTGAAGAC CCGGAAGCCG ACGCCCAACG CTTCACCGTC AGCCCCAACG GCGTCGTCCT CGTCACTCCG GAAATGCTCG GTCAGGAGAT CCACGTTGTC TATTGA
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Protein sequence | MLPQRSPRFV SRLTRDTLAL ILAGGRGTRL HELTQWRAKP AVPFGGKFRI IDFPLSNCIN SGVRRIGVLT QYKAHSLIRH IRQGWSSLSS DFGEFIELLP AQQRIADSWY LGTADAVYQS LDIVRLHDPD YVLILAGDHI YKMDYGPLLA YHVERGADVT VSCLEVAIEE ATAFGVMAID EENRVVRFDE KPAQPAPIPG RADRALASMG VYVFNRDFLF RTLGADARTS SEHDFGKDII PQLIDQARVV AYPFRDLSTG EQAYWRDVGT IDAFWKTNLE LIDVTPELNL YDREWPIWTF QEQLPPAKFV FDEEDRRGTV VDSMVSGGCI ISGAQLRRSL LFSSVIVDER TRVEDSVILP EAHIGPGCRI RNAVIDKYCH IEAGTVIGED PEADAQRFTV SPNGVVLVTP EMLGQEIHVV Y
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