| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1105 |
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| Symbol | |
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| ID | 4709911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1199010 |
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| End bp | 1201256 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639855577 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001002683 |
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| Protein GI | 121997896 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.545328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGGCC CATCCGGGGC GAGCGGCACC GCAGCGGCGC CTGAGCGGAG GTCAGGCTTG
AATCGCGTTA GCCAACAGCG CGCCGAGGCC GAAGAGCGCC AGCGGATCGC CGAGGGGCGC
CACTCGGATC CCTTCGCCTA CCTCGGCGGC CCCCACGGCC CGAGCCGGCG GGTGCGCATC
TACCACCCGG AGGCGGCGGC AGTGGCCTTT AGCGAGGGCA CCGAGGTGCC GCGCGTTGCC
GGCACCGACT TCTTCGAGGC GCCGCTGCCC GAGGCCCTTG AGGCGCCGTA CCAGGTCTGC
TGGCGGGATG CCGGGGGTGC CTGGCACACC GCCTACGACC CTTACGCCTT CCCGCCGGTG
CTCTCGGAGT TCGACCTGCA CCTCTACGCC GAGGGGCGGC ACTGGCACGC TCAGCGCTTC
CTGGGGGCGC ACTGCACCAC GGTTGACGGG GTGGCAGGCG TGGTCTTTTC GGTTTGGGCG
CCCAACGCCG AGCGGGTCAG CGTGGTGGGG GATTTCAATC GCTGGGATGG GCGCCGCCAC
CCCATGCGCC TGCGCCTGGA GGCCGGGGTC TGGGAGCTGT TTATCCCCGG GGTGGAGCCG
GGGGCCCTGT ACAAGTTTGA GCTGCGGGGA GCCGGCGGCT GCGGGCCGCT GCTCAAGACC
GACCCCTGTG GCCGGCGCTA CCAGCACCGG CCCGAGACCG CCGCCGTGGT GGAGCCGCCC
GAGGCCTACC CCTGGGGGGA TGATGCGTGG ATGGAGCGCC GCCGGCGCGA GGGGAGCGCC
TGGCAGCAGG CACCGTGGTC GATCTACGAG GTGCATCTGG GCTCCTGGCA GCGGGATGTC
GGGGGGGGGT TCCTCGACTA CCGCACCCTG GCCCACGAGC TGGTCGACTA CGTCCAGCGC
ACGGGCTTCA CCCACATCGA GCTGCTGCCG ATCACTGAGC ACCCGTTGGA CGACTCCTGG
GGGTATCAGG CCACCGGCTA CTTCGCCCCG ACCAGTCGGT TCGGCGAGCC GGACGCGTTT
CGCTACTTCG TGGACTACTG CCACCGCCAC GGTATCGGCG TGATCCTGGA CTGGGTACCG
GCTCACTTTC CCCGGGACGC ATGGGCCCTG GCCCGTTTCG ACGGTACGCC GCTCTACGAG
CACGCTGATC CCCGGCAGGG CGAGCACCGC GACTGGGGGA CGCTGATCTT CAACTTCGGT
CGTAACGAGG TGCGCAGCTT CCTGCTCTCC AGCGCCCTCT ACTGGCTGGA GGCCTACCAC
CTGGACGGGC TCCGGGTGGA TGCGGTCGCC TCGATGCTCT ACCTGAACTA CTCCCGCGAA
GACGGGGACT GGGTGCCGAA CATCCACGGC GGCAACGAGA ACCTGGAGGC CATTGCCTTC
CTGCGCGAGG TGAACACCGT CACCCACGGC GAGCAGCCGG GGACCTGCAT CATCGCCGAG
GAGTCCACCT CCTGGCCCCA GGTCACGCGG CCCACCTACC TCGGTGGGTT GGGGTTCACC
ATGAAGTGGA ACATGGGCTG GATGCACGAC ACCCTGACCT ACCTCGGCGA GGACCCCGTC
CATCGCCGCT ACCACCACGA CCAGCTGACC TTCGGCCTGC TCTACGCCTT TACCGAGAAC
TTCGTCCTGC CGTTCAGTCA CGACGAGGTG GTCCACGGCA AGGGCAGCCT GCTCGACCGC
ATGCCCGGCG ACGACTGGCA GCGCCTGGCG AACCTGCGCC TGCTCTACGC CTACCAGTTC
ACCTACCCGG GCAAGAAGCT GCTGTTCATG GGCTGCGAGA TCGGCCAGCG CAGCGAGTGG
GACGCCGATG CCACGGTGGA CTGGGCGGCC CTGTCCGACC CGCGCCACGC CGGCGTGCAG
CGTCTGGTCA GTGATCTCAA TGCGCTCTAC CGTGGCGTGC CGGCCCTCCA CCGCTACGAC
TTCGCCGAGG CGGGTTTCGC CTGGGTGGAT TGCCACGACG CCGAGCAGTC GGTACTCAGC
TACCTGCGCC GCGGCGATGC CGGGGAGCAG GCGCTGGTGG TCCTGAACTT TACGCCGGTC
CCCCGCCACG GCCACCGGCT GGGCGTGCCG GCCCCCGGGC GCTGGACAGA GCGGATGAAC
ACCGACTCGG CTTACTACGG CGGATCGGAC CTGGGCAATG CCGGCGGTGT GCTCGCCGAG
CCGGTGCCGT GGAGTGGCTA CCCCTACTCA GTGACCCTGA CCCTGCCACC GCTGGCCGGC
CTGGTGCTGG TCGGGGAGGG GGCGTGA
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| Protein sequence | MGGPSGASGT AAAPERRSGL NRVSQQRAEA EERQRIAEGR HSDPFAYLGG PHGPSRRVRI
YHPEAAAVAF SEGTEVPRVA GTDFFEAPLP EALEAPYQVC WRDAGGAWHT AYDPYAFPPV
LSEFDLHLYA EGRHWHAQRF LGAHCTTVDG VAGVVFSVWA PNAERVSVVG DFNRWDGRRH
PMRLRLEAGV WELFIPGVEP GALYKFELRG AGGCGPLLKT DPCGRRYQHR PETAAVVEPP
EAYPWGDDAW MERRRREGSA WQQAPWSIYE VHLGSWQRDV GGGFLDYRTL AHELVDYVQR
TGFTHIELLP ITEHPLDDSW GYQATGYFAP TSRFGEPDAF RYFVDYCHRH GIGVILDWVP
AHFPRDAWAL ARFDGTPLYE HADPRQGEHR DWGTLIFNFG RNEVRSFLLS SALYWLEAYH
LDGLRVDAVA SMLYLNYSRE DGDWVPNIHG GNENLEAIAF LREVNTVTHG EQPGTCIIAE
ESTSWPQVTR PTYLGGLGFT MKWNMGWMHD TLTYLGEDPV HRRYHHDQLT FGLLYAFTEN
FVLPFSHDEV VHGKGSLLDR MPGDDWQRLA NLRLLYAYQF TYPGKKLLFM GCEIGQRSEW
DADATVDWAA LSDPRHAGVQ RLVSDLNALY RGVPALHRYD FAEAGFAWVD CHDAEQSVLS
YLRRGDAGEQ ALVVLNFTPV PRHGHRLGVP APGRWTERMN TDSAYYGGSD LGNAGGVLAE
PVPWSGYPYS VTLTLPPLAG LVLVGEGA
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