| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1100 |
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| Symbol | |
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| ID | 4710030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1190980 |
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| End bp | 1192824 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855571 |
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| Product | DNA primase |
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| Protein accession | YP_001002678 |
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| Protein GI | 121997891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGGGC GGATCCCTGA CGAGTTCATC GATGAGGTGC TGCAACGCAC CGACATCGTC
GCTGTTGTCG GCGAGCGGGT GCCCCTGCGC CCGGGTGGCA GCAACTACAA GGCACGCTGC
CCCTTCCACG ACGAGCGCAC CCCCTCGTTC AACGTCAGCC CCGAACGACA GACCTACCAC
TGCTTCGGCT GCGGTGCCCA CGGCACGGCC ATCCGCTTCC TCATGGAACA CGACCGCATG
GAGTTCCGTG AGGCCATCGA GGAGCTGGCC AACCGGGTCG GCCTGGAGAT CCCGGACACC
GGCGGTGCAC GCCGGCCTGC CGATGAGTTC GCCCCGCTCT ACCGGGCCAT GGCCCACGCC
GACCAGTTCT TCCGCGACGC CCTGCGCAAC CACCCCGCAC GCCAGAGCGC TGTGGAATAC
CTCCGCCAGC GCGGCATCTC CGGCGAGGTG GCCGCCCGCT TTGGCCTGGG GTTCGCGCCG
CCGGGTTGGG ACAACCTGCT CCGCCAGCTC AACGACCCCC GACCGGCCAT CCGCGCCGGC
CTGGTGATCG AGCGCGACCA GAAGACCTAC GACCGCTTCC GCGACCGCAT CACCTTCCCG
ATCCACGATC GCCGCGGCCG GGTCGTCGCC TTCGGCGCCC GAGTCGTGTC GGAGGGCGAA
CCCAAATACC TCAACTCCCC GGAGACCCCG ATCTTCCACA AGGGCCGCGA GGTCTACGGA
CTCTACCAGG CCCTGCAGGC GGAACGCCGC CCCGGGCGAC TGATCGTGGT CGAGGGGTAC
ATGGACGTCA TCGCCCTGAC CCAGCAGGGC ATCCCCGGGG CCGTAGCCAC CCTGGGCACC
GCGACCACCG CCGAGCAAGC GACCCTGCTG CTGCGCTCCG CAGACGAGCT GGTTCTCTGC
TTCGACGGCG ACGACGCTGG CCGTAGCGCC GCACTGCGCG CTGTGGAAAA CCTCCTCCCG
GTCCTGCAGG GCGACCGAGA GGTCGGCGTC CTGCTGCTCC CCGAGGGCAC CGACCCCGAC
GATCTGGTCC GCAGCGAGGG CCGCGAGGCC TTCGAGAACC GTCTCGCGAC CGCCACGCCG
GTGATCGAGT TCTACCTGGC CCGCCTCGGC GAGGCGTGTG ACCTCACCAC CGTCGACGGC
CGCGCCCGCC TCCTCGAACG CGCCAGCGGC TCGCTCCGCC GACTGCCTCG CGGCGTCATC
CGGGAGACGC TCATCGGCCA ACTCGCCGAA CTGACCCGCA CCGAGCCGGA ACGCATCGAC
CGCATCCTGG AAGGCCGCGC CGAGACACCG CGGGACGACC CGGCACCGCA GGGCCGCAGC
GCCCCGCGCA CGCCCGAAGC GAGCCTCCAG CGAACGCCGG TGCGCCACGC CATCGCCCTG
CTGCTGCAGC AGCCCCAGCT GGCCACCCAC GCCGGCGACC CCGACCGCTT CGCTGACCGC
GACACTCCTG GACTAGAATT ACTGCAACAG CTCCTTGAAT TGGCCCGCAC GGAACCCAAC
ATGACCACGG CAAGGATCCT AGAGCGGTTC CGCGATACGC CCCACGAGGC CCCGCTGCAC
CGGCTCGCAG CCTGGCAGCG GACCGCCATG GCCGAGGGAG ACCATCAACA GGAGTTTCAG
GATGCCCTCA TGCGCATCGA GGAGCAGATC ATCCACAACG AGCAGAAGCG GTTGGTACGA
GCGCTGGACC AGGTCGGGCA GGATGATCAG ACCATCGACC GAGAGCAGGA GCTGCTGCGC
CAAGCAACGC GACTGCAGCT GCTGATGGAT CGGCTCAAGC GCGGCCGGAT CAGCGCCGAT
GAAGAGCAGG AGATGCGGGA ACTTCGGGCG GCCTTTCGAC TCTAA
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| Protein sequence | MAGRIPDEFI DEVLQRTDIV AVVGERVPLR PGGSNYKARC PFHDERTPSF NVSPERQTYH
CFGCGAHGTA IRFLMEHDRM EFREAIEELA NRVGLEIPDT GGARRPADEF APLYRAMAHA
DQFFRDALRN HPARQSAVEY LRQRGISGEV AARFGLGFAP PGWDNLLRQL NDPRPAIRAG
LVIERDQKTY DRFRDRITFP IHDRRGRVVA FGARVVSEGE PKYLNSPETP IFHKGREVYG
LYQALQAERR PGRLIVVEGY MDVIALTQQG IPGAVATLGT ATTAEQATLL LRSADELVLC
FDGDDAGRSA ALRAVENLLP VLQGDREVGV LLLPEGTDPD DLVRSEGREA FENRLATATP
VIEFYLARLG EACDLTTVDG RARLLERASG SLRRLPRGVI RETLIGQLAE LTRTEPERID
RILEGRAETP RDDPAPQGRS APRTPEASLQ RTPVRHAIAL LLQQPQLATH AGDPDRFADR
DTPGLELLQQ LLELARTEPN MTTARILERF RDTPHEAPLH RLAAWQRTAM AEGDHQQEFQ
DALMRIEEQI IHNEQKRLVR ALDQVGQDDQ TIDREQELLR QATRLQLLMD RLKRGRISAD
EEQEMRELRA AFRL
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