Gene Hhal_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1097 
Symbol 
ID4709961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1189218 
End bp1190129 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID639855568 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_001002675 
Protein GI121997888 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAC AGCCAACCCC ACCACGAAGC CTGGATCTGG CCCTGCGCAT CCTGGCGCGG 
GCCCCCCTGC CCGTGCTGCA CGCCGCTGGC ACCACCATCG GTGCCGCGCT GGCCCACCTG
CCCAACCGGC CACAACGGGT GGCGGAGATC AACCTGCGGC TCTGCTTCCC GGCGCAGGAT
GCCCACCAGC GGCGCCGCCT GCTCCGCCGC ACCCTGCAGG AGACGTGCAA GACCGCCCTG
GAACTCGCCC CGGTCTTCAA ACGCCCCCCG GAACAGGTGC TGCGCTGGGT GCGCCAGGTC
CATGGCCAGG AGCATTTCGA TCAGGCCCTC GGCGAGGAGC GGGGCGTCCT ATTGCTCGCC
CCGCATATCG GCTGCTGGGA GTTGCTCAAC CTTTGGGTGG CGGCCCGGCA GCCGCTCACC
GCCCTCTACC GCCCCCCGCG CCAACCCGCG CTGGAGCCGA TCCTGCTCGC CGGGCGCTCG
CGCAATGGGG CGCGCTTGCT CCCCGCCGGC CCTCAGGGTG TACGGGGCGT GCTCCGCGCC
CTCGGCCGCC GGGAGGTAGT TGGCATCCTG CCGGACCAGG AGCCGGACGG CAGCGAACCC
TTCGCGCCCT TCTTCGGCGT CCCCGCCAAG ACCATGACCC TGGCCGGGCG CATCGCCCAA
CGTTCAGGGG CGGTGCCACT GCTCGCCTTC GCCGAGCGAC TCCCCGGCGG GCGTGGCTTC
GATCTGCACT TCTTTCCCGC CGAGGAGGCC GTAGCGGATC CGGACCCCGC GGTGGCCGCA
GCAGCGGTCA ACCGCGGGGT CGAGCAGTGC GTTCGCCGCG TGCCGGCGCA GTACCAGTGG
ACCTATAAGC GCTTCAACAC CCAGCCGGAC GGCACTTCGC CCTACCCGAA AAAACGGCGC
CGTCGAGCTT GA
 
Protein sequence
MTQQPTPPRS LDLALRILAR APLPVLHAAG TTIGAALAHL PNRPQRVAEI NLRLCFPAQD 
AHQRRRLLRR TLQETCKTAL ELAPVFKRPP EQVLRWVRQV HGQEHFDQAL GEERGVLLLA
PHIGCWELLN LWVAARQPLT ALYRPPRQPA LEPILLAGRS RNGARLLPAG PQGVRGVLRA
LGRREVVGIL PDQEPDGSEP FAPFFGVPAK TMTLAGRIAQ RSGAVPLLAF AERLPGGRGF
DLHFFPAEEA VADPDPAVAA AAVNRGVEQC VRRVPAQYQW TYKRFNTQPD GTSPYPKKRR
RRA