Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_1084 |
Symbol | |
ID | 4709876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1177347 |
End bp | 1178768 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639855555 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001002662 |
Protein GI | 121997875 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.737232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATC ACTACGATGT CATCGTCATC GGTGCCGGTC CCGCCGGCTA CAGCGCTGCC ATCCGCTGCG CCCAGCTGGG CATGCGCACC GCCGTGGTCG ACGCCTTCGT CTTCAAGGAC GGCGAACCCG CCCTGGGCGG GACCTGCCTG AACGTCGGCT GCATCCCCTC CAAGGCGCTG CTCGACAGCT CCGAGCAGTA CCACAAGGTC ACCCACCAGC TCAGCGCCCA CGGCATCACG GCCCAGGGGG TGGAGCTGGA TGTCGAGAAG ATGATCGCCC GCAAGGATCG GGTGGTGAAG GACCTGACCG GCGGCATCCG CCAGCTGTTC AAGGCCAACA AGATCGAGTG GCTGCACGGC CACGGTCAGC TGGTCGAGGC GAAGACCGTG GAGGTGCGCC GTCCGGATGG CAGCACCGAG CGGCACAGCG CTGACTCCGT GGTGCTGGCC ACGGGCTCGC AGAGTGTCGA GCTCGGCGCC GCACCACTGG ATCACGAACG CATCGTCAAC TCCGATCGGG CCCTGGACTT CACCGAGGTC CCGGAGCGAC TCGGTATCAT CGGCGCCGGG GTCATCGGCC TGGAGATGGG GTCGGTGTGG AGCCGGCTTG GTTCCGAGGT CGTGCTGCTC GAGGCGCAGG ACGAGTTCCT CGGGCCGGTG GACCGCCAGG TGGCGCGCAC CGCGCAGAAG GAGTTCAAGA AGCAGGGCCT GGACATCCGC TTGGGCTGCC GGGTGACCGG CACCCGGGTC GATGGCTCGG TCACGGTCTC CTACGAGGAC AAGAACGGGA AGCAGGAGCT GGAGGTCGAT CGCCTCATCG TCTGCGTCGG CCGTCGCCCG AACACCGACG ACCTGTGCTC CAAGGAGGTG GACCTGCTCC TCGATGAGCG CGGCTTCATC AACGTCGACG AGGACTGCAA GACCAACCTG CCGGACGTCT ACGCCGTCGG TGACGTGGTC CGCGGCCCGA TGCTCGCCCA CAAGGGCCAG GAAGAGGGGA TCGTGGTGGC CGAACGGATC GCCGGTAAGG GGGGGCACCT CAACTACGAG ACCATCCCCT GGGTCATCTA CACCGACCCC GAGATCGCCT GGGTGGGCCG GACCGAGGAG CAGCTGAAGA AGGCCGGCAT CCCCTACAAC ACCGGGGTTT TCGGCTTCGC TGCCAATGGT CGGGCCCGCG CCATGGATCA GACGGCGGGG ATGGTCAAGC TCATCGCCCA CGCCGAGACC GACCGGCTGC TCGGGGCCCA TATCATCGGC CCGCAGGCCT CCGAGCTCAT TGCCGAGGCC GTGGTGACCA TGGAGTTCGC CGGTTCCGCC GAGGACATCG CCCGGACCAT CCACGCCCAC CCGACGCTCT CCGAGACGGT CCACGAGGCG GCCCTGGCCG TCGGCAAGCG GGCGATCCAC AAGGCCAACT GA
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Protein sequence | MSNHYDVIVI GAGPAGYSAA IRCAQLGMRT AVVDAFVFKD GEPALGGTCL NVGCIPSKAL LDSSEQYHKV THQLSAHGIT AQGVELDVEK MIARKDRVVK DLTGGIRQLF KANKIEWLHG HGQLVEAKTV EVRRPDGSTE RHSADSVVLA TGSQSVELGA APLDHERIVN SDRALDFTEV PERLGIIGAG VIGLEMGSVW SRLGSEVVLL EAQDEFLGPV DRQVARTAQK EFKKQGLDIR LGCRVTGTRV DGSVTVSYED KNGKQELEVD RLIVCVGRRP NTDDLCSKEV DLLLDERGFI NVDEDCKTNL PDVYAVGDVV RGPMLAHKGQ EEGIVVAERI AGKGGHLNYE TIPWVIYTDP EIAWVGRTEE QLKKAGIPYN TGVFGFAANG RARAMDQTAG MVKLIAHAET DRLLGAHIIG PQASELIAEA VVTMEFAGSA EDIARTIHAH PTLSETVHEA ALAVGKRAIH KAN
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