| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1072 |
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| Symbol | prpB |
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| ID | 4709864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1164605 |
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| End bp | 1165510 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855543 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001002650 |
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| Protein GI | 121997863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.765825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGAGC AGTCATCCGC CGGGCGGCGG TTCCGCGACG CGGTCGCGGA CGAACGCCCG
CTGCAAGTGG TGGGGGCCAT CAATGCCTAC TCGGCACTGC TTGCCGAGCG GGCCGGGTTC
CGGGCGCTGT ATGTCTCGGG GGCGGGGGTG GCCAATGCCT CCTACGGTCT GCCGGATCTG
GGGATCACTC AGCTGGCGGA CGTCGTCGAG GATGTGCGGC GCATCACCGA CGCGACCCGT
ACCCCGGTGC TGGTGGATAT CGACACCGGC TTCGGCGGGG CCTTCAGTGT GGCCCGCACC
GTCCGGGAGC TGACGCGAGC CGGGGCGGCC GCGGTGCACA TCGAGGATCA GGTCCAGGCC
AAGCGCTGTG GGCACCGCCC GGGCAAGGAA CTGGTCTCCA CCGCCGAGAT GGTCGACCGG
GTGAAGGCGG CGGTGGATGC CCGTACGGAC CCCGAGCTGG TGGTCATGGC GCGGACCGAT
GCCCGGGCCT CCGAGGGGCT CGAGGCGGCC GTGGAGCGCG CTGAGGCCTA TGTGGAGGCC
GGCGCCGATA TGGTCTTCGC CGAGGCCATG CACAGTCTGG ACGATATCCG CGCCTTCACC
GACCGCGTGC CGGTGCCGGT GCTGGCCAAC ATCACCGAGT TCGGCAAGAC CCCGTACTTT
ACGGTGGAGG AGTTGCGCGA GGCGGGTGCG GGCCTGGTCC TGTATCCGCT GTCGGCCTTC
CGTGCCATGA GCCGGGCCGC TGAAGCGGTC TACGGTGCCA TCCGTGCTGA CGGTACCCAG
GAGCGGGTGC TCGATCGCAT GCAAACGCGC GAGGAACTCT ACGAGGTACT CGGTTATCAC
GACTACGAGC GCAAGCTCGA TGAGCTCTTC GGGCGCGACG GACGAACAGG AGGAGGACAG
CGATGA
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| Protein sequence | MTEQSSAGRR FRDAVADERP LQVVGAINAY SALLAERAGF RALYVSGAGV ANASYGLPDL
GITQLADVVE DVRRITDATR TPVLVDIDTG FGGAFSVART VRELTRAGAA AVHIEDQVQA
KRCGHRPGKE LVSTAEMVDR VKAAVDARTD PELVVMARTD ARASEGLEAA VERAEAYVEA
GADMVFAEAM HSLDDIRAFT DRVPVPVLAN ITEFGKTPYF TVEELREAGA GLVLYPLSAF
RAMSRAAEAV YGAIRADGTQ ERVLDRMQTR EELYEVLGYH DYERKLDELF GRDGRTGGGQ
R
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