| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1065 |
|---|
| Symbol | |
|---|
| ID | 4709843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1156613 |
|---|
| End bp | 1157260 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639855536 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001002643 |
|---|
| Protein GI | 121997856 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTGC TGATCATCGG GGCCCACGGG CAGGTGGGAC GGCGGCTGGT GGAGCGGCTC
GCGCCGAGCC GTCACGAGGT GCGGGCCATG GTCCGCGACC CGGACCAGCA GCCGGCCCTG
GCGGCTGCTG GGGCCACCGA GACGGTGGTG GCGGATCTGG AGCGCGACTG CAGCCAGGCG
GTCCGCGGCA CCAACGCCGT GGTCTTCACG GCCGGCTCGG GGCCCCATAC CGGTACCGAT
AAGACCGAGG CGGTGGACCG CCGCGGGGCG CTGCGGATCA TCGACTTGGC CGAGGCGGCC
GGAGTGGATC GCTTCCTGAT GGTCTCATCG ATGCGCACCG AGTGTCCGGA AGAGGCCCCG
GAGCGGCTGC GGCCGTATCT GGATGCCAAG CGCGAAGCCG ATGAACGCCT GCGCAATACG
GCCATGGACT GGACCATCCT GCGGCCGGGG CGGCTGCTCA ACGAGCGGGC GCGAGGCAAG
GTGAGCCTCG GTGAGGGGCT GCCCTACGGC GAGATCCCGC GGGACGACGT GGCCGCGCTG
TTGGCGGCCC TGATCGACGC TGAGGCGGCG TCGCGGCGCA CACTGGATGC CGTATCCGGC
GAAACCGCCG TGCGCGAGGC GGTCCGCCGG CTCGGTGTTC GTTCCTGA
|
|---|
| Protein sequence | MRVLIIGAHG QVGRRLVERL APSRHEVRAM VRDPDQQPAL AAAGATETVV ADLERDCSQA
VRGTNAVVFT AGSGPHTGTD KTEAVDRRGA LRIIDLAEAA GVDRFLMVSS MRTECPEEAP
ERLRPYLDAK READERLRNT AMDWTILRPG RLLNERARGK VSLGEGLPYG EIPRDDVAAL
LAALIDAEAA SRRTLDAVSG ETAVREAVRR LGVRS
|
|---|
| |