| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1058 |
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| Symbol | |
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| ID | 4709824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1146729 |
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| End bp | 1147823 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639855529 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001002636 |
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| Protein GI | 121997849 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01463] methyltransferase, MtaA/CmuA family
[TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAGCT CTGAGCTCAA GAACGATCGA ATCCTGCGCG CTTTCCAGCG CCAGCCCGTG
GACCGGACCC CGGTCTGGAT GATGCGCCAG GCCGGCCGCT ATCTGGCCGA ATATCGAGAG
GTGCGGGCCC AGGCCGGCAG CTTCATGGGC CTGTGCCGCA GCCCCGAGCT GGCGGCCCGG
GTGACCATGC AGCCGCTGGA GCGCTACGAG CTCGACGCCG CCATTCTCTT CTCGGACATC
CTCACCATCC CCGAGGCCAT GGGGCTCGGC CTGAACTTCG TCACCGGCGA GGGGCCGGTC
TTCGAGCACC GGGTCAAGAC CGCCGCCGAC ATCGACCGGC TGCCCCAGCC CTCGGCCCAG
AAAGAGCTGC GCTACGTCAT GGATGCGGTG GCAGCCTGCC GCAAGGAGCT GAACGGACAG
GTGCCGCTGA TCGGCTTCAC CGGCAGCCCG TGGACCCTGG CCACTTACAT GATCGAAGGC
GGCTCGAGCA AGACCTTCGC CGCCAGCAAG AGTCTGCTCT TCAACGAGCC GGAGGCCGCG
CACCGGCTGA TGGCCAAGCT CGCCGACACC GTGGCCGACT ACCTCAACGG CCAGGTAGAG
GCTGGCGCGC AGGCGCTGAT GATCTTTGAC ACCTGGGGCG GGGCCCTGGA TCCGGTGCGT
TACCGGGAGT TCTCGCTGGC CTATATGCAG CGCATCCTCG AGCAACTCCC CCGCGAGCGC
GAGGGGCGTC GTATCCCGGT CACCCTGTTC ACCAAGGGCG GCGGCCAGTG GCTGGAGGAT
ATCGCCGACA CCGGCTGTGA CGGCGTCGGC CTCGACTGGA CGACCTCGCT GGCCGACGCC
CGGCGCCGGA TCGGCGGCCG GGTGGCCCTG CAGGGGAACC TCGATCCGTG CATGCTCCAC
GCCAACCCCG AGGTCATCCG CCGCGAGGTG GCCCGCTGCC TGGAAGAGTT CGGCCACGGT
CCGGGCCACG TGTTCAACCT TGGCCACGGC ATCCAGCCGG AGACGCCGCC GGAGAATGTC
GATGCCATGA TCCGGGCCCT CCACGAACTC TCGCCGGCCT ACCATGACGC AACGGCCACC
TCGGCCACGT CGTAG
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| Protein sequence | MSSSELKNDR ILRAFQRQPV DRTPVWMMRQ AGRYLAEYRE VRAQAGSFMG LCRSPELAAR
VTMQPLERYE LDAAILFSDI LTIPEAMGLG LNFVTGEGPV FEHRVKTAAD IDRLPQPSAQ
KELRYVMDAV AACRKELNGQ VPLIGFTGSP WTLATYMIEG GSSKTFAASK SLLFNEPEAA
HRLMAKLADT VADYLNGQVE AGAQALMIFD TWGGALDPVR YREFSLAYMQ RILEQLPRER
EGRRIPVTLF TKGGGQWLED IADTGCDGVG LDWTTSLADA RRRIGGRVAL QGNLDPCMLH
ANPEVIRREV ARCLEEFGHG PGHVFNLGHG IQPETPPENV DAMIRALHEL SPAYHDATAT
SATS
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