| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1048 |
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| Symbol | |
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| ID | 4709804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1134147 |
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| End bp | 1134827 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639855519 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001002626 |
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| Protein GI | 121997839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000483627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAAGC CGTGGATCGC ACCGTCCATC CTGTCCGCCG ACTTCGCCCG CCTGGGCGAT
GAGGTCAACG CCGTGCTCCA GGCCGGCGCC GACGTCATCC ACTTCGACGT CATGGACAAC
CACTACGTCC CCAACCTGAC CATCGGCCCG CTGGTCTGCC AGGCGCTGCG CGATCACGGC
ATCACCGCGC CCATCGACGT GCACCTGATG ATCAAGCCGG TGGACCGAAT CATCCCGGAC
TTCGCCGCGG CCGGTGCCGA CTGGATCACC TTCCACCCGG AGGCCAGCGA GCACGTCGAC
CGCTCCCTGA GCCTGATCCG CGAGCACGGC TGCAAGGCCG GCCTGGTGTT CAACCCGGCC
ACGCCGCTCG ATTGCCTGCG CTATGTCGCG GACAAGGTCG ACATGGTGCT GCTGATGTCG
GTCAACCCCG GCTTCGGGGG GCAGAAGTTC ATCCCCGGAA CCGTCGACAA GATCCGCGAA
GCCCGGCGAC TGATCGACGA GCTGAACCCC GGGGCCCGTC TCGAGGTCGA CGGCGGGATC
AAGGCCGAGA ACATCCGTCA GGTGGCCGAG GCCGGCGCAG ACACCTTCGT GGCCGGCTCG
GCGGTCTTTG GCGCCGACGA TTACGGCCAG GCCATTGCCG ATATGCGCAA GGAGCTCGAG
GCTGCGCACC GCGCCGGCTG A
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| Protein sequence | MNKPWIAPSI LSADFARLGD EVNAVLQAGA DVIHFDVMDN HYVPNLTIGP LVCQALRDHG
ITAPIDVHLM IKPVDRIIPD FAAAGADWIT FHPEASEHVD RSLSLIREHG CKAGLVFNPA
TPLDCLRYVA DKVDMVLLMS VNPGFGGQKF IPGTVDKIRE ARRLIDELNP GARLEVDGGI
KAENIRQVAE AGADTFVAGS AVFGADDYGQ AIADMRKELE AAHRAG
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