Gene Hhal_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_1026 
Symbol 
ID4709634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1100189 
End bp1100983 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID639855497 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001002604 
Protein GI121997817 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.928762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAGC CCCTGGACGG TACCGGCGTT ATCGTCACCC GACCGACCCA CCAGGCGGAG 
GGTCTGGTCC ACGCCCTGGA GGCGGCGGGT GCCGGCGTTT GGCGGTTCCC CACCCTGGAT
ATCATCGCCG AACCGGAAGA TGCCGCGCGG CAGGAGGCGG CCCGGCGAGC CGCCTGCGCC
GACTGGCTGA TCTTCGTCAG CCAGAACGCC GTCGCCCATG GGCTACCGCG CATCCGCGCC
GCCGGGGGCC CCGCCGGCCA CGCCCGCTGC GCCACCGTCG GCCAGGGCAC AGCCGAGGCA
CTTCGTCGCA ACGGCATCGA GGAGGTGCTT TACCCCCGAC ACGGCGCCAC CAGCGAGGAT
CTGCTGGCGG AAACAGATCT TGGCAGGATC AGCGCGGGCC GTGTCATGAT AGTTCGCGGA
GTTGGGGGGC GACCGTATCT CGCCGAGGCG CTCCGCGCCC GTGGCGCGGA AGTGGATTTT
CTGGAAGTCT ATCGGCGCGT CCGGCCATCG ACCGACCCCG CCCCGCTCCT TGAGGCCGCC
GAGGCCGATC GGGTTCAGGT CGTCGTCGCC ACCAGCGGCG AGGTCCTGGA CAACTTCCTG
GAGCTGGTCG GGGATCGTGG CCGACGGTGG CTCGCCCGGG CCGGCGTTGT CGTCATCGGC
GAGCGCGTGG CCACCATGGC AGCCCCCCAC GCCGGACATG TCGAGATCGC GGCAACCGCG
GCGGAAGAAG AGCTCACGGC GGCCACCGCA CGCGCCGCCA GGGCCGTGGC AGAGATCAGG
AGTAGGCGAA GATGA
 
Protein sequence
MTQPLDGTGV IVTRPTHQAE GLVHALEAAG AGVWRFPTLD IIAEPEDAAR QEAARRAACA 
DWLIFVSQNA VAHGLPRIRA AGGPAGHARC ATVGQGTAEA LRRNGIEEVL YPRHGATSED
LLAETDLGRI SAGRVMIVRG VGGRPYLAEA LRARGAEVDF LEVYRRVRPS TDPAPLLEAA
EADRVQVVVA TSGEVLDNFL ELVGDRGRRW LARAGVVVIG ERVATMAAPH AGHVEIAATA
AEEELTAATA RAARAVAEIR SRRR