| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1025 |
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| Symbol | hemC |
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| ID | 4709633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 1099260 |
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| End bp | 1100192 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639855496 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001002603 |
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| Protein GI | 121997816 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0857406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTG AATCCCTGCG AATCGCCACC CGCCGTTCCC AGCTTGCCAT GTGGCAGGCC
GAGCACATTG CCGCCGAGTT GCAGCGCCTG CACCCCGGCC TGGAGGTGGA GCTGGTCCCC
ATGTCCACCC GTGGGGACGA GATCCTCGAC CAGCCGCTAG CGCGCATCGG CGGCAAGGGC
CTGTTTATGA AGGAGCTCGA GGACGGCATG CTGCGCGGCG AGGCCGACCT GGCCGTGCAC
TCGATGAAGG ACATCCCCTG GCGCCTGCCC GAGGGCTTCG ACCTGGCTGC CGTCTCGGAC
CGGGCCGACC CGCGGGACGC CTTCGTCTCC AACCACTATT CCGACCTGGA TGAGCTGCCC
CACGGCGCCC GGGTGGGCAC GGCCAGCCTG CGCCGCCAGT GCCAGATCAT GGACCGCCGC
CCCGACCTGC AGATCGAGGT CCTGCGCGGC AACGTCCAGA CCCGCCTGCG CAAGCTCGAT
GACGGCGTCT ACGACGCGAT CATCCTGGCC GCCTCCGGGC TCGACCGCCT GGAGCTGACC
CACCGCATCG CCGGACGCCT CACGCCGGAG CAGAGCCTGC CGGCGGTGGG CCAGGGCGCC
CTGGGCATCG AGTGCCGCGA GGGCGATGAG CGGGTGATGA AGCTCGTCGA GGGGCTCAAT
CACGAGGCCA CCCGCATCCG GATCAACGCC GAGCGGGGCA TGAACGCCCG ACTCGAGGGC
AGCTGCCAGG TCCCCATCGG CGGCTACGCG GAGCTCGACG GCGATGAGGT CCACCTGCGG
GGGCTGGTAG GCGCCATCGA CGGCAGCGAG GTCATCCGGG GCGAGATCCG CGGCCCCGCC
GCGGAGGCCG AGAACCTCGG CCGACAGCTG GGTGACGATC TGCTCGCCCG CGGTGCCGAC
CGCATCCTCA AGGCCGTCGC CGAGCAGCAA TGA
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| Protein sequence | MAAESLRIAT RRSQLAMWQA EHIAAELQRL HPGLEVELVP MSTRGDEILD QPLARIGGKG
LFMKELEDGM LRGEADLAVH SMKDIPWRLP EGFDLAAVSD RADPRDAFVS NHYSDLDELP
HGARVGTASL RRQCQIMDRR PDLQIEVLRG NVQTRLRKLD DGVYDAIILA ASGLDRLELT
HRIAGRLTPE QSLPAVGQGA LGIECREGDE RVMKLVEGLN HEATRIRINA ERGMNARLEG
SCQVPIGGYA ELDGDEVHLR GLVGAIDGSE VIRGEIRGPA AEAENLGRQL GDDLLARGAD
RILKAVAEQQ
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