| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1023 |
|---|
| Symbol | |
|---|
| ID | 4709217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1096846 |
|---|
| End bp | 1097643 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639855494 |
|---|
| Product | dimethyladenosine transferase |
|---|
| Protein accession | YP_001002601 |
|---|
| Protein GI | 121997814 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.867687 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCATC GCCCACGCAA GCGCTTCGGG CAGAACTTCC TCCGCGACCC GGCGGTCATC
CAGCGTATGG TCACGGCCAT CGCCCCGCGG GAGGGGGAGA CGCTGCTGGA GATCGGCCCC
GGCGAGGGGG CGTTGACCGA ACCGCTGCTG GCGCGCCTGG GCACGCTCAC CGCGGTGGAG
CTGGATCGCG ATCTGGCGCC CCGGTTGCAG GAGCGGTTTG CCCCGGCGCT GAGGGTGATC
GAGGGCGACG CCCTGGCACT GGATCCGGCC GAACTGGCTC CGGCCCAGGG CCGGCTGCGG
GTGGTGGGCA ACCTGCCCTA CAACGTCTCG ACGCCGATCC TCTTCCATCT GCTCGCTGCG
GCCGATGTCA TCGAGGATCT GCATCTGCTC CTCCAGCGCG AGGTGGTGGA TCGGATGGTG
GCGCCGCCAG GGGGCAAGAC CCGCGGGCGG CTGTCGGTGA TGGTCCAATA CCGGTGTCGG
GTGGAGCGCT GTTTCAATGT GCCCGCCGGG GCGTTCTTCC CGGCGCCGAA GGTGATGTCG
TCGTTTGTCC GCCTGGTGCC GCACCGGCCA CTGCCGGCGC GGGCACAGGA CGAGGCGTGG
CTGCAGGAGG TGGTCACGGC GGCCTTCGGC GGGCGGCGCA AGACGCTGCG CAACAGCCTC
AAGGGGTTGG TGACGGCGCA GGCGTTCGAG GCGGCCGGGG TCGATCCCGG GGCGCGGGCG
GAGACGCTGT CGGTGGAGGC TTTCGTGCGT CTGGCCGATG CCGCACGGAG CGCGCCGGCG
GCCGCCGCAG GGCGGTGA
|
|---|
| Protein sequence | MSHRPRKRFG QNFLRDPAVI QRMVTAIAPR EGETLLEIGP GEGALTEPLL ARLGTLTAVE
LDRDLAPRLQ ERFAPALRVI EGDALALDPA ELAPAQGRLR VVGNLPYNVS TPILFHLLAA
ADVIEDLHLL LQREVVDRMV APPGGKTRGR LSVMVQYRCR VERCFNVPAG AFFPAPKVMS
SFVRLVPHRP LPARAQDEAW LQEVVTAAFG GRRKTLRNSL KGLVTAQAFE AAGVDPGARA
ETLSVEAFVR LADAARSAPA AAAGR
|
|---|
| |