| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1009 |
|---|
| Symbol | |
|---|
| ID | 4709585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1081268 |
|---|
| End bp | 1082398 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639855480 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_001002587 |
|---|
| Protein GI | 121997800 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA GCGCCCTACC CGGCAGCCAG GGGGTCGGAG TCCGTCTCTC GTTCCTGCAG
TCGCGGCTGC ACCTGGACGG ACTGCTGCTG ACCGCACTGA TCGCCGTCGC CGCCTTCGGC
GTAGCGGTCC TCTACAGCGC CTTCGGGGAG GACTGGGCGC AGACCCAGAA TCAGGTCATC
CGCGTCTCCT TCGGCTTCCT GGCACTGTTC GCCTGCGCCC AGATCCCGCC GCGCACCCTG
CGCCGCTGGG CACCGTGGGT CTTTGCCGTC GGCATGGTGC TGCTGGCAGC GGTGATGGTC
CTGGGCGTCA TCGGCCAGGG GGCACAGCGC TGGATCGACC TCGGCTTCAT GCGCTTCCAG
CCGGCCGAAT TGATGAAGCT CGCCCTGCCG CTGCTGCTCG CCTGGCTGCT CGCCGACCAC
GATATCCCGC CCCGGCCCCG GCGCGTCATG CTGGCCCTAG TGTTGATCAC CGTGCCGGCG
GCGCTGATCG CGATACAGCC GGACCTGGGC ACCGCCATGC TGGTCGCGGC ATCGGGATTC
TTCATCCTCT TCCTGGCCGG CCTGGGCTGG CGCTGGATCG TGGGCGGCGC CGCCCTGGCC
AGCGCCATTG CGCCACTGCT CTGGTTCTTT GTCATGCACG ACTACCAGCG CGCACGGGTG
CTGACGTTTC TCAACCCCGA GAACGACCCC CTGGGCGCGG GGTACCACAT CATCCAGTCG
AAGATCGCCA TCGGCTCCGG CGGGCTCTTC GGCAAGGGCT GGCTCAACGG CTCCCAGGCC
CACCTGGAGT TCATCCCCGA GCGCCACACC GACTTTGTAC TGGCGGTGGT CGCCGAGGAG
TTCGGTCTTA TGGGGGTGGC CCAGCTGCTG GCCGTCTACC TGATCATCGT CGGCCGCGGT
CTCTACATCG CCGCCCGCGC CCAGGACAAC TTCAGCCGGC TGCTGGCCGG CAGCATCTCG
CTGACCTTCT TCATCTACGT CCTGGTCAAC GCCGGGATGG TCTCGGGACT GCTGCCGGTG
GTCGGACTGC CCCTACCCCT GGTCAGCTAC GGCGGCTCGT CACTGGTGAC CATCATGGCG
GCTTTCGGTA TTCTCATGTC GATCCATACC CACCGTCGTC TCTGGTCGTG A
|
|---|
| Protein sequence | MNTSALPGSQ GVGVRLSFLQ SRLHLDGLLL TALIAVAAFG VAVLYSAFGE DWAQTQNQVI
RVSFGFLALF ACAQIPPRTL RRWAPWVFAV GMVLLAAVMV LGVIGQGAQR WIDLGFMRFQ
PAELMKLALP LLLAWLLADH DIPPRPRRVM LALVLITVPA ALIAIQPDLG TAMLVAASGF
FILFLAGLGW RWIVGGAALA SAIAPLLWFF VMHDYQRARV LTFLNPENDP LGAGYHIIQS
KIAIGSGGLF GKGWLNGSQA HLEFIPERHT DFVLAVVAEE FGLMGVAQLL AVYLIIVGRG
LYIAARAQDN FSRLLAGSIS LTFFIYVLVN AGMVSGLLPV VGLPLPLVSY GGSSLVTIMA
AFGILMSIHT HRRLWS
|
|---|
| |