Gene Hhal_1008 details

Gene Information

• Locus tag: Hhal_1008
• ID: 4709584
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1079349
• End bp: 1081271
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639855479
• Product: peptidoglycan glycosyltransferase
• Protein accession: YP_001002586
• Protein GI: 121997799
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCCTTT CCATCCGTGA TCAGCAACAG GATGCCTCCA GGATCCAGCG ACGGATCGTG 
GTCGCCGGTG TGCTCTGCAT CCTGGTGGTC GCCGGGCTGA TGACCCAGAT GGTGCGCCTG 
CAGGTGGTCG ATCACCACCA CTACGCCACC CTCTCCCAGG AGAACCGCAT CAAGGTCAAC 
GCCATACCAC CGAGCCGTGG CCAGATCCTG GACCGCAACG GCGCCATCCT CGCCGAGAAC 
CGCCCCTCGT ACCAGCTAGT GGCCACGCCG GAACGCATCC CGGATATCGA GACCATGCTC 
GATGAGGTCA GCGACATCAT CGAGCTCACC GACGCCCAGC GCAAGCGTTT CCTCAACCGC 
CTGAGCAACT CGCGTCACTT CGAGGCCCTG CCGCTGCGCA CCCGGCTCGA CGAGGAAGAG 
GTCGCCAAGC TCGCCGTCCA CCGCCACCGC TTCCCCGGCC TGGAGGTGGA CGCCCGGCTG 
GTGCGCCACT ACCCGGAAGG CCACACCGGC AGCCATGCGG TGGGCTACGT AGGGCGCATC 
ACCGCCCGGG ACCTGCGCCG CATCGACCGC TCGGCCTATC GCGGCACCAA CCACATCGGT 
AAGAGCGGCG TCGAACACGC CTATGAGCAG GTCCTCCACG GCGAGGTGGG CGTCGAACGC 
GTCGAGACCA ACGCCGCCGG GCGGGTGCTA CGCACCCTCG ACCGCCACCC GCCGCGCTCC 
GGTGACGATC TGATCCTGAC CCTGGACATC GACCTGCAGG CTGCCGCCGA GCGCGCCCTC 
GGCGATCAGC GCGGGGCGGT GGTGGCCATG GATCCGGACA ACGGCGACAT CCTGGCCCTG 
GCCAGTCGCC CGCACTACGA CCCCAACAAG TTCGTCCGGG GCATGACCTC CGAGCGCTTC 
CAGGAGCTGG AAGACACCGG CTGGCAGCCG CTGATCAACC GGCCGATCCG CGGGCTCTAT 
CCACCGGCCT CCACCATCAA GCCGTTCGTC GGCCTGGCCG CCCTGGAGCA CGACGTCATC 
CGCCCAGACA CCGAGGTCCA CTGCGACGGC ACCTACCATG TGGAGGGTCG CGACGAGCCC 
TTCCGCTGCT GGCGCGACTG GGGCCATGGC GACACCGACT TCGTCCAGGC CGTGGCCGAG 
TCTTGCAATG TCTTCTTCTA CGACACCGCC TTCCGCCTCG GCATTGACCG CATGTCGGCG 
TTCCTGGAAC CGTTCGGTTT CGGCACCCCG ACTCAGGTAG ACACCTCGGG CGAGCGCAGC 
GGCATCCTCC CCGATCGCGA CTGGAAGCGC CGCGCCCTGG GCGGCGGCTG GTTCCACGGA 
GAGACGGTGA TCACCGGTAT CGGCCTGGGC TACTTCAGCA CCACGCCGCT GCAGCTGGCT 
CGGGCCACCT CGATCCTCGC CAACCAGGGA CGCATCGTGG AACCGCGCCT GGTGCAGGCG 
GTCCGCGACG GCGAGCAGGG GCACGAATCA CGAACCGCCG CCACTACCCC GCAGGAGCGC 
ATCGAGTTGA GCAACCCGGA GCACTGGGAG CTCACCACCG AGGCCATGCG CGCCGCCGTC 
GAGCACCCGC GCGGCACCGC CCGGCTGATC GGCGACGACC TCGAGTACAG CCTGGCCGGC 
AAGACCGGTA CGGCGCAGGT CACCGAGAGC CACGAGGACG ACGACGCGGA CGTCCCCGAG 
CACCTGCGCA GTCACGCCCT GTTCATCGGG TTTGCCCCGG CGGAGACCCC GGAGATCGCC 
GTCGTGGTGG TGGTCGAGAA CGCCGAAGGC GGCGGTGGTG CTGCAGCCGC CCCGGTGGCG 
CGGGCCGTCA CCGACGCCTG GCTGATGGAT GATTACACCT TCCTCGAGGA CCTGGAGGCC 
GGCCGCATCG ACGAGAGCGA GGTCGAGGAC GAGGAGGATG CGCCCATGGA GCTGATGCCA 
TGA 

 

Protein sequence

MSLSIRDQQQ DASRIQRRIV VAGVLCILVV AGLMTQMVRL QVVDHHHYAT LSQENRIKVN 
AIPPSRGQIL DRNGAILAEN RPSYQLVATP ERIPDIETML DEVSDIIELT DAQRKRFLNR 
LSNSRHFEAL PLRTRLDEEE VAKLAVHRHR FPGLEVDARL VRHYPEGHTG SHAVGYVGRI 
TARDLRRIDR SAYRGTNHIG KSGVEHAYEQ VLHGEVGVER VETNAAGRVL RTLDRHPPRS 
GDDLILTLDI DLQAAAERAL GDQRGAVVAM DPDNGDILAL ASRPHYDPNK FVRGMTSERF 
QELEDTGWQP LINRPIRGLY PPASTIKPFV GLAALEHDVI RPDTEVHCDG TYHVEGRDEP 
FRCWRDWGHG DTDFVQAVAE SCNVFFYDTA FRLGIDRMSA FLEPFGFGTP TQVDTSGERS 
GILPDRDWKR RALGGGWFHG ETVITGIGLG YFSTTPLQLA RATSILANQG RIVEPRLVQA 
VRDGEQGHES RTAATTPQER IELSNPEHWE LTTEAMRAAV EHPRGTARLI GDDLEYSLAG 
KTGTAQVTES HEDDDADVPE HLRSHALFIG FAPAETPEIA VVVVVENAEG GGGAAAAPVA 
RAVTDAWLMD DYTFLEDLEA GRIDESEVED EEDAPMELMP