| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1004 |
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| Symbol | gatC |
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| ID | 4709578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 1076409 |
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| End bp | 1076696 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639855475 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
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| Protein accession | YP_001002582 |
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| Protein GI | 121997795 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCATCG ACGCAGATGA GGTGCAGCAG ATTGCGCACC TGGCACGCAT CCGGATCGAC
GAGGAGGCGG TCTCCGGCTA CGCCCGCGAC CTGACCGGGA TCCTGGCGTT CGTCGAGCAG
ATGGGGAATG TCGATACCGA CGGCGTCGAG CCCATGGCCC ACCCGTGGGA TGCCACGCAG
CGGCTGCGCC CGGACGAGGT CACCGAACCC AATCTGCGCG AGCACTACCA GTCCGGGGCC
CCGGCCGTCG AAGCCGGCCT GTACCTCGTC CCCCGCGTCG TCGAGTAA
|
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| Protein sequence | MAIDADEVQQ IAHLARIRID EEAVSGYARD LTGILAFVEQ MGNVDTDGVE PMAHPWDATQ
RLRPDEVTEP NLREHYQSGA PAVEAGLYLV PRVVE
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