Gene Hhal_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0995 
Symbol 
ID4709567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp1067599 
End bp1068033 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID639855466 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001002573 
Protein GI121997786 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCGA CAAGACACGC GATGCCGGTC AAGGGCTTTG AGCCGTATCA GGCCGGTGAG 
ACGGAAGAGT ACATGAGTGA CGAGCAGCTG GAGCACTTCC GCCAGCTGCT GCTGGCGTGG
AAGCGTGAGC TCCAGGAAGA GGTGGAGCGC ACCGTCCACC ATATGCGCGA CGACGCCAAC
AACCACGCCG ACCCGTCGGA CCGGGCTACC CAGGAAGAAG AGTTCGCCCT GGAGCTACGG
GCCCGGGATC GGGAGCGCAA GCTGATCCGC AAGATCGATC AGGCGCTGGA CGGCATCCGC
ACCGGCGACT ACGGCTACTG CGAGCAGTGC GGGGTCGAGA TCGGTCTGCG GCGGCTCGAG
GCGCGTCCGA CGGCGACCCT GTGCATCGAC TGCAAGTCGC TGGAAGAGAT CCGCGAGCGG
CAGCGCGTGG CCTGA
 
Protein sequence
MAPTRHAMPV KGFEPYQAGE TEEYMSDEQL EHFRQLLLAW KRELQEEVER TVHHMRDDAN 
NHADPSDRAT QEEEFALELR ARDRERKLIR KIDQALDGIR TGDYGYCEQC GVEIGLRRLE
ARPTATLCID CKSLEEIRER QRVA