| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0991 |
|---|
| Symbol | |
|---|
| ID | 4709563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 1063114 |
|---|
| End bp | 1063725 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639855462 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_001002569 |
|---|
| Protein GI | 121997782 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.389925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTA GATGGAGCCC GCGGCTGCTC GCCGGGCTGC TGGCGGCGCT GGTGCTGTCG
GGGTGCGCCC TGTTGGTCCC CGAGGACGAG CGGGAGGCGC AGTACGAGGC CTTTCTGGAG
GAGCGTGCCG AGCTGCGAGA CTGGTCGGTG GCTGGCCGGG CAGCGCTGCG CGCCGAGGGT
GAGGCGGTGA GCCTCTCCTT ACGCTGGGAG CAGCGAGGCG AGGTGTACAC CATCAACTTA
TCCGGCCCGT TCGGGGCCGG GGCGGTGCGC ATCGAGGGGC AGCCGGGGCG GGTGACCCTG
CGGGACGGCG CCGGGCAGAG CGCCACGGCG CAGAGCCCGG AGGAGCTGCT GGCGGCGCAG
ACCGGCCACC AGCTGCCCGT GACCGCGCTG CGTGACTGGA TCGTCGGGCG CCCGGCGGAC
GGTCTGGAGG TGGACGAGCT GAGCCTGGAC CGTGTCGGGC GCCCGGACCG TCTCGAACAG
GCCGGCTGGC GGGTCGATTT CCAGGGGTGG ACGGACGTCG ATGGGGTCGA TCTGCCGAGC
CGGGTCGATC TGACCCGCGG TTCGACGCAG ATGCGGGTCG CCCTCTCAGG CTGGAGTCGC
AGCGATGACT GA
|
|---|
| Protein sequence | MTGRWSPRLL AGLLAALVLS GCALLVPEDE REAQYEAFLE ERAELRDWSV AGRAALRAEG
EAVSLSLRWE QRGEVYTINL SGPFGAGAVR IEGQPGRVTL RDGAGQSATA QSPEELLAAQ
TGHQLPVTAL RDWIVGRPAD GLEVDELSLD RVGRPDRLEQ AGWRVDFQGW TDVDGVDLPS
RVDLTRGSTQ MRVALSGWSR SDD
|
|---|
| |