Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0973 |
Symbol | rph |
ID | 4709502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1045137 |
End bp | 1045853 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639855442 |
Product | ribonuclease PH |
Protein accession | YP_001002551 |
Protein GI | 121997764 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCCAA GCGGTCGACG GGCCGACGAG CTACGCCCGA TCTCCATCCA GCGCCAGTTC ACCAAACACG CCGAGGGCTC GGTGCTCATC GGCTTTGGCG ATACGCGCGT GCTGTGCACG GCCAGCGTCG AGGCGCGCGT GCCCCCCTGG CTGCGCGGCC AGGGCCGGGG CTGGGTGACC GCCGAGTACG GCATGTTGCC ACGCTCGACC CACACCCGCA GCGACCGCGA GGCGGCCCGC GGCAAGCAGC AAGGGCGGAC TGTCGAGATC CAGCGGCTGA TCGGCCGCTC CCTGCGCGCC GCCGTCGATC TGCAGGCCCT GGGCGAGCGT AGCGTGGTGG TCGACTGCGA CGTGCTGCAG GCCGATGGCG GGACCCGGAC GGCGGCGATC ACCGGTGCCT TCGTGGCCCT GACCGACGCC CTGGAAGGGC TGGTGCGCCA GCGCGCGCTG CCGGCGTCGC CCCTCCACGG TCAGGTGGCG TCGGTCTCCG TGGGGGTCTA CCGCGGTGAG CCGGTGCTCG ACCTGGACTA TGCCGAGGAC GGCGAGGCGG AGACCGACAT GAACGTGGTG ATGAACGACG CCGGCGCCTT CATCGAGCTG CAGGGCACCG CCGAGGGGCA CGCCTTCCGG CGCGATGAAC TCGATCGGAT GCTGGCCCTG GCCGAGAAGG GCGTGGGTGA GCTGTTGCAG CATCAGCAGG AGGCATTGGC GACATGA
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Protein sequence | MRPSGRRADE LRPISIQRQF TKHAEGSVLI GFGDTRVLCT ASVEARVPPW LRGQGRGWVT AEYGMLPRST HTRSDREAAR GKQQGRTVEI QRLIGRSLRA AVDLQALGER SVVVDCDVLQ ADGGTRTAAI TGAFVALTDA LEGLVRQRAL PASPLHGQVA SVSVGVYRGE PVLDLDYAED GEAETDMNVV MNDAGAFIEL QGTAEGHAFR RDELDRMLAL AEKGVGELLQ HQQEALAT
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