Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0969 |
Symbol | |
ID | 4709488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 1040683 |
End bp | 1042872 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639855438 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001002547 |
Protein GI | 121997760 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.406599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCG CCGCGAGTGT CATCAACGCC GGTGAATCGG CGTCGGCTTC CGACCCGGAG CGGCGCGTTC AGGAGGTTTG TGCGCTACTC GAGCGCTACC TCGAGCCCCA CCAGATCGAG CAGGTCTACG ACGCCTACCG TTTCAGCGCC GCCGCCCACG AGGGGCAGCG GCGCCGCTCC GGCGAGCCCT ACATCACCCA CCCGATCGCC GTGGCCCGCA TCCTCGCCGA GATGCGCCTG GATGCCGAGG CCGTTGTAGC CGCGCTGCTC CACGACGTCA TCGAGGATAC GCCCACCGCC AAGGAGCGGA TCGCCGAGCG CTTCGGCGAG CAGGTGGCCG AGCTGGTGGA CGGAGTCTCC AAGCTCGGCG CCATCGACTT CCAGAGCAAG GAAGAGGCCC AGGCGGAGAG CTTCCGCAAG ATGATCCTGG CCATGGCCAA GGACATCCGC GTCATCCTCA TCAAGCTCGC CGACCGCCTC CACAACATGC GCACGATCTG GATCATGCGT CCGGAGAAGC GCCGCCGCAT CGCCCGCGAG ACCCTCGACA TCTACGCCCC CATCGCCCAG CGGCTGGGCA TCAACAGCCT GCGCACCGAG CTCGAGGACC TGGGCTTTGC CGCGCACTAC CCGCTGCGCT ACCGGGCGCT CAAGGAGAAG CTCGCCCGCC AGCGGGGGCG GCGCGGGGTG ATCCTCGACA CCGTCTGCGA CCAGGTGCGC ACCCGCCTGG AGCAGGCTGG GATCCAGGCC GAGGTGGTCG GGCGTGAGAA GCATCTGTGG TCCATCTACT GCAAGATGGC CCAGAAACAG CTCAACTTCC GCGACGTCTT CGACGTCTAC GGCTTCCGGG TGGTGGTGGA CACGGTGGAC GAGTGCTACC GCGTCCTCGG CATCCTGCAC GGGCTCTACA AGCCGCGCCC GGGGCGCATC AAGGACTACA TCGCCATCCC CAAGGCCAAC GGCTACCAGT CGCTGCACAC CACGCTGGTC GGGCCGCATC GCATCCGCCT CGAGGCGCAG ATCCGCACCC GGGATATGCA CGCCGTGGCC GAGTCGGGCA TCGCCGCCCA CTGGTTCTAT AAGGATGCCG GCGAGAGCGG TAACACGGCC CAGGTCCGTG CCCGGCAGTG GGTCAAGGAC CTGCTTGAGA TGCAGCGCAG TGTCGGCACG TCCGAGGAGT TCATCGAGAG CGTCAAGATC GACCTGGTCC CCGACGAGAT CTACGTCTTC ACCCCCAAGG GCGACATCCT CGAGCTGCCG AGCAATGCCA CCCCGGTGGA TCTGGCCTAC GCCATCCACT CTGACGTGGG TAACTCCTGC ATCGCCGCCA AGGTCGACCA CCGCCTCACG CCACTGCGTA CGCCGCTGCA GAGCGGGCAG ATGGTCGAGA TCATCACCGC CCCGGTGGGG CGGCCCAATC CGGTCTGGCT GGATTTCGTG GTGACCGCCA AGGCGCGCAC CGCCATCCGT CACGCCCTCA AGCGGCTGCG CGACGACGAG GCCATCGAGC TCGGCCGGCG CATGGTCGAG CGCGCCCTCT CGGCGTTGTC GGTGGATCTC GACGCCCTCG ACCCGGCGCG CGTCGACGAG GCCCTGGCCG GCACGGGCCT CGCCAGTCTC GACGACCTGT TCCGCGATGT CGGTCTGGGC AACCGGGTGC CGTGGCTGGT GGCGCAGCAG CTCAGTGGTC TCGAGCAGGG CGAGGCCGAG CTGGAAGAGC GCCCCGAGGA GCCCGAGCCC CACGGGACCC TGACCATCCG CGGCAACGAG GGCACGGTGG TCTCCTTCGC GCGCTGCTGC CGGCCGATCC CCGGCGACCC GATCGTCGGC TTCGTCAGCA CCGGTCGTGG CGTGGTCATC CACCACCGTG ATTGCAAGAA CGTGGCCAGT CAGCGCAAGC GTTCCGAGAG CTGGGTGGAC GTGGACTGGG AGGCCGACGT CGATGCCGAG TTCCCCACCC TGATCGGCAT CGACGTGGTC AACGAGCGTG GCGCCCTGGC TCAGCTCGCC CACGGGATCT CGGCGCAAGG GGCGAGCATC GAGAACGTGA CCATCGAGGA GCGCGACGGC ATGATCGCCA CCGTCCGCTT CCTGATCCTG GTTCGTGACC GCCGCCACCT GGCGGCCGTG GTGCGCCATC TGCGGGCGAT GCCCCCGGTG CAGCGCATCG TGCGCAAGAA AGACGGCTAA
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Protein sequence | MARAASVINA GESASASDPE RRVQEVCALL ERYLEPHQIE QVYDAYRFSA AAHEGQRRRS GEPYITHPIA VARILAEMRL DAEAVVAALL HDVIEDTPTA KERIAERFGE QVAELVDGVS KLGAIDFQSK EEAQAESFRK MILAMAKDIR VILIKLADRL HNMRTIWIMR PEKRRRIARE TLDIYAPIAQ RLGINSLRTE LEDLGFAAHY PLRYRALKEK LARQRGRRGV ILDTVCDQVR TRLEQAGIQA EVVGREKHLW SIYCKMAQKQ LNFRDVFDVY GFRVVVDTVD ECYRVLGILH GLYKPRPGRI KDYIAIPKAN GYQSLHTTLV GPHRIRLEAQ IRTRDMHAVA ESGIAAHWFY KDAGESGNTA QVRARQWVKD LLEMQRSVGT SEEFIESVKI DLVPDEIYVF TPKGDILELP SNATPVDLAY AIHSDVGNSC IAAKVDHRLT PLRTPLQSGQ MVEIITAPVG RPNPVWLDFV VTAKARTAIR HALKRLRDDE AIELGRRMVE RALSALSVDL DALDPARVDE ALAGTGLASL DDLFRDVGLG NRVPWLVAQQ LSGLEQGEAE LEERPEEPEP HGTLTIRGNE GTVVSFARCC RPIPGDPIVG FVSTGRGVVI HHRDCKNVAS QRKRSESWVD VDWEADVDAE FPTLIGIDVV NERGALAQLA HGISAQGASI ENVTIEERDG MIATVRFLIL VRDRRHLAAV VRHLRAMPPV QRIVRKKDG
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