| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0943 |
|---|
| Symbol | |
|---|
| ID | 4709672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1020252 |
|---|
| End bp | 1021112 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639855412 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001002521 |
|---|
| Protein GI | 121997734 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAT CGCCCAACGT CGTCGACGTC ACCGTCGAGA ACTTCAAGGA ACAGGCCATC
GATGCCTCGA TGCAGCAGCC TGTGCTGATC TACTTCTGGG CGCAGTGGTG CGAGCCCTGC
AAGACCCTCA GCCCGCTGCT GGAGAAGCTG GCCGACGAGT ACAAGGGCGG CTTCCGCCTG
GCCAAGGTGG ACTGCGATCA GCAGCAGCAG CTGGCTGCGC AGGTCGGGGT GCAGAGCCTG
CCCACCGCCC TGCTGGTCAA GGAGGGCCAG CCGGTGGACC AGTTCATGGG AGCGGTCCCC
GAGGGGGAGC TGCGCCAATG GCTGGGTCAG TACGTGGAAG CGCCTGAGGC CGACCCCTAC
GAGCAGGCCC GCGAGCTGAT GAGCGAGGGC CGCTCCGCCG AGGCCGTCCC CTACCTGCGG
GCCGCCCGGG AGCAGCGCCC CGATGACGCC GGGGTGACCA TCGACCTGGC CCGTGCGCTG
CTGCAGAGCG GCGACGCCGA CGAGGCCTTC ACCCTGATTG AGGGGCTCTC CACCAACGAC
CAGCAGGACC CCCGCGCCCA GGGCATCCTG GCCCGCAAGG AGTTCGCCGA GCGGGTGCGC
GACCTGCCCC CGCTCGAGAC GCTGGAGCAG CGTGTGGAGG CCGACGCCGG GGACGGCCAG
GCCCGCCTGG AGCTCGCCCT GCGCTTGGTG GTCGCCGGCG GCGAGCTGGA GGCCCTCGAT
CACCTGCTGC ATCTGGTCCA GCGCGACCGC GAGCGCCGCG ACGAGGCCCA CCAGGTGGCG
CTGCAGGTGC TCGGCATGCT CGGCCCGGAG CACCCGGAGG CCCGCCGCTA CCGCCAGCGG
CTATTCCAGC TGCTCCATTG A
|
|---|
| Protein sequence | MSASPNVVDV TVENFKEQAI DASMQQPVLI YFWAQWCEPC KTLSPLLEKL ADEYKGGFRL
AKVDCDQQQQ LAAQVGVQSL PTALLVKEGQ PVDQFMGAVP EGELRQWLGQ YVEAPEADPY
EQARELMSEG RSAEAVPYLR AAREQRPDDA GVTIDLARAL LQSGDADEAF TLIEGLSTND
QQDPRAQGIL ARKEFAERVR DLPPLETLEQ RVEADAGDGQ ARLELALRLV VAGGELEALD
HLLHLVQRDR ERRDEAHQVA LQVLGMLGPE HPEARRYRQR LFQLLH
|
|---|
| |