Gene Hhal_0941 details

Gene Information

• Locus tag: Hhal_0941
• Symbol: pyrB
• ID: 4709631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 1017962
• End bp: 1018948
• Gene Length: 987 bp
• Protein Length: 328 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639855410
• Product: aspartate carbamoyltransferase catalytic subunit
• Protein accession: YP_001002519
• Protein GI: 121997732
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0540] Aspartate carbamoyltransferase, catalytic chain
• TIGRFAM ID: [TIGR00670] aspartate carbamoyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.253806
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGTGC AACTCGACCC CCAGGGGCAG CTGCGCCACC TGGTTACCAC CGAGGGGCTG 
CCCCGCGAGC TGCTGACCCG CATCCTCGAT ACCGCCGAGT CGTTCTCCGG GGTCCTTGGC 
AAGTCGGTGA AGAAGGTGCC GCTGCTGCGC GGACGGACCA TCATCAACCT CTTCTTTGAG 
CCGAGTACCC GCACCCGCAC CACCTTCGAG CTGGCCGCCC AGCGGCTCTC GGCCGACGTG 
CTCAACATCG ACGTCGCCAC CTCCTCCACC AGCAAGGGGG AGAGCCTGCT GGACATGCTG 
CGCAATCTCG AGGCGATGCA GTGCGACGCC TTCGTGGTCC GCCACGCCGA CAGTGGCGCC 
GCCGAATTCA TCGCCCGCCA CGTCGCCCCC GGGGTGGCGG TGATCAACGC CGGCGACGGG 
CGCCACGCCC ACCCCACCCA GGCGCTGCTT GACGCCTTCA CCATCCGCCG CGAGAAGGGC 
CCCCTGGAGC CGCTGACCAT CGCCATTGTC GGCGATATCC TCCACTCGCG GGTGGCCCGC 
TCGCAGATCC ACGCCCTGCT CGGCCTCGGC GCCGGCGAGG TGCGGGTGAT CGGGCCGCGC 
ACGCTGCTGC CGCGGGATAT CCAGCGCCTG GGCGTGCGGG TCTATGAGGA CATGGATGCC 
GGGCTCGACG GCGCCGACGT GCTGATCATG CTCCGCCTCC AGCGCGAGCG CATGCGCGGC 
GCCTTGCTAC CGAGCGAGAG CGAGTACTTC TCGCGCTACG GTCTGACCGA ACAACGCCTG 
GAGCGCACCC ACCCGGAGGC CATCGTCATG CACCCGGGTC CGGTCAACCG GGGCGTCGAA 
CTCGATCCGC AGGTGGCCGA CGGTCCCCGC TCGGTGATCC TGCGCCAGGT CACCAACGGT 
ATCGCGGTGC GCATGGCGGT CATGTCCATC GTCCTGGGCG GGCACGGCGA GGCGCCCGCG 
GAACCGATCG AGGAGGCGTC GAGTTGA 

 

Protein sequence

MSVQLDPQGQ LRHLVTTEGL PRELLTRILD TAESFSGVLG KSVKKVPLLR GRTIINLFFE 
PSTRTRTTFE LAAQRLSADV LNIDVATSST SKGESLLDML RNLEAMQCDA FVVRHADSGA 
AEFIARHVAP GVAVINAGDG RHAHPTQALL DAFTIRREKG PLEPLTIAIV GDILHSRVAR 
SQIHALLGLG AGEVRVIGPR TLLPRDIQRL GVRVYEDMDA GLDGADVLIM LRLQRERMRG 
ALLPSESEYF SRYGLTEQRL ERTHPEAIVM HPGPVNRGVE LDPQVADGPR SVILRQVTNG 
IAVRMAVMSI VLGGHGEAPA EPIEEASS