Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0890 |
Symbol | |
ID | 4711009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 967466 |
End bp | 968341 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639855359 |
Product | CBS domain-containing protein |
Protein accession | YP_001002468 |
Protein GI | 121997681 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.192583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGACG GAGAAGCGAA CAGTAGCAAC GGCGCCGGCG AGAGCGTCTC ATGGCGTGAT CGCCTGCGCC GGCTAGTCAC CCAGGTGGAG CCCCGTTCGC GGGATGAACT GGTCGATCAT CTGCGCCGCA GCCAGTCGGT GGGGCTGCTC GACGCCGACG CCCTGTCCAT GATCGAGGGC GTGCTCCACG TCTCCGAGCT CCAGGCCCGG GATATCATGA TCCCCCGCTC CCAGGTCACC ACCGTGGCCC GGGACACCGC GCCCCACGAC TTGCTGCCGA CCATCGTGCG CACCGGCTAC TCCCGCTTCC CGGTCACCGG CGAGAGCAAG GACGATGTCA TCGGCATCCT CCTCGCTAAG GACCTGCTGC GGCTCTTCTA CGAAGAGGGG CACAACGGCT TCCGGCTGCG TGAGGTCCTG CGCCCGGTCC TGTTCATCCC CGAGAGCAAG CGGCTCGACG CGTTGCTCAA GCAGTTCCGC GAGAGCCGCA ACCACATGTC GGTGGTGGTG GACGAGTACG GCGGTCTGGC CGGCATCGTC ACCATCGAGG ACGTGATCGA GCAGATCGTC GGCGAGATCG ACGACGAGCA CGACTTCGAC GAGGACGCCC CCATCCTGGC CCGGGACGAC GGCAGCTGGA TCGTCAAGGC GGTCACGCCC ATCGAGGCGT TCAACGAGGC CCTCTCCGCC GGGCTCAAGG AGGATGACCT CGACACGGTT GGTGGCCTGG TGGCGCAGCG TTTCGGCCAC GTGCCGTGCC GCGGCGAGCG CATCGTCTTT GCCGGCTTCG AGTTCCGGGT GCTGCGCGCC GATCAGCGCC GCATCCACCT GCTGCGGGTC ATGCCCGTGG GAAGTGAGGG CCATGAGGAC GGCTGA
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Protein sequence | MPDGEANSSN GAGESVSWRD RLRRLVTQVE PRSRDELVDH LRRSQSVGLL DADALSMIEG VLHVSELQAR DIMIPRSQVT TVARDTAPHD LLPTIVRTGY SRFPVTGESK DDVIGILLAK DLLRLFYEEG HNGFRLREVL RPVLFIPESK RLDALLKQFR ESRNHMSVVV DEYGGLAGIV TIEDVIEQIV GEIDDEHDFD EDAPILARDD GSWIVKAVTP IEAFNEALSA GLKEDDLDTV GGLVAQRFGH VPCRGERIVF AGFEFRVLRA DQRRIHLLRV MPVGSEGHED G
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