Gene Hhal_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0876 
Symbol 
ID4709374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp954208 
End bp955410 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content66% 
IMG OID639855345 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_001002454 
Protein GI121997667 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.81136e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGG AAGATGCACA GGCGCTGATT CGACGCGGGG TTGAGGAGAT CATTCCGGAG 
GCGGAGCTCG ACGAGCGCCT GCGATCGGGC AAGCGGCTGC GCATCAAGGC CGGCTTCGAT
CCCACCGCGC CGGATCTGCA CCTTGGCCAC ACCGTGCTGA TCAACAAGCT GCGCCAGTTT
CAGGACCTGG GGCACGAGGT GCTGTTCCTG ATCGGCGATT TCACCGCCAC CATTGGTGAT
CCGAGCGGCA AGAGCGCCAC CCGTCCGGCA CTGACTCCGG AGGAGGTGCG TCAGAACGCG
CGCACCTATG AGGAGCAGAT CTACGCCATC CTCGACCCGA AGCGCACCCG GCTGGTCTTC
AACTCCGACT GGATGGGCAC CATGCAGGCT GGCGATCTGA TCCAGCTCGC CTCCCGCTAC
ACCGTGGCGC GCATGCTCGA GCGGGACGAC TTCCATCAGC GCTACCAGGC CGGCTCCGCC
ATCGCTATCC ACGAATTCCT CTACCCGCTG ATCCAGGGCT ACGACTCGGT GGCCCTTGAG
GCGGACATCG AACTCGGCGG CACCGATCAG CGGTTCAACC TGCTCGTCGG GCGCGAGTTG
CAGCGCCAGT TCGGGCAGAA GCCGCAGACG GTGCTGACCA TGCCCCTGTT GGTCGGGCTC
GACGGGCACA AGAAGATGTC CAAGTCCCTG GGCAACTACG TTGGCGTCAA GGAGTCCGCC
GAGGACATCT ACGCCAAGCT GATGTCCATC TCCGACGACC TGATGTGGCG TTACTTCGAG
TTGCTCAGCC TGCGTCCGTG GCGCGAGGTC GAGGCCCTGC AGGCGCGGAT CCGCGATGAG
GGGATGAACC CCCGGGATGC CAAGGACGCC CTGGCCTACG AGCTGGCGGA GCGCTTCTGC
GGTGCCGTCG AGGCGCAGCG CGCCCGTGAG GCCTTCGTGG CCCGCTTCCG CCACGGCGCC
GTACCGGAGG ATGTGCCGCA GGTCACCCTG ACCTATGATG AGCAAGGGGG GGTAGGCATC
GCCGCCGCCC TAAAAGAGGC CGGGCTCGTG GGCTCGACCT CCGAGGGGCT GCGCATGGTT
CGTCAGGGGG CTGTGCGGGT CGATGGCGAG CGGATCGAAG ACCCCAAGGC GCGCCTGGAG
TCCGGCCGTG CGCACCTGCT GCAGGTGGGC AAACGCCGGT TTGCGCGGGT GAGTGAAAAT
TAG
 
Protein sequence
MTMEDAQALI RRGVEEIIPE AELDERLRSG KRLRIKAGFD PTAPDLHLGH TVLINKLRQF 
QDLGHEVLFL IGDFTATIGD PSGKSATRPA LTPEEVRQNA RTYEEQIYAI LDPKRTRLVF
NSDWMGTMQA GDLIQLASRY TVARMLERDD FHQRYQAGSA IAIHEFLYPL IQGYDSVALE
ADIELGGTDQ RFNLLVGREL QRQFGQKPQT VLTMPLLVGL DGHKKMSKSL GNYVGVKESA
EDIYAKLMSI SDDLMWRYFE LLSLRPWREV EALQARIRDE GMNPRDAKDA LAYELAERFC
GAVEAQRARE AFVARFRHGA VPEDVPQVTL TYDEQGGVGI AAALKEAGLV GSTSEGLRMV
RQGAVRVDGE RIEDPKARLE SGRAHLLQVG KRRFARVSEN