Gene Hhal_0871 details

Gene Information

• Locus tag: Hhal_0871
• Symbol: secE
• ID: 4709951
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 944057
• End bp: 944467
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639855330
• Product: preprotein translocase subunit SecE
• Protein accession: YP_001002449
• Protein GI: 121997662
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0690] Preprotein translocase subunit SecE
• TIGRFAM ID: [TIGR00964] preprotein translocase, SecE subunit, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.734931
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCGCC GGACCGCTTC GGTAGCAGGG TCCATGAAGT CAAAGGCAGA GACTGCGAAA 
TCCCCGCTTG ACGTCGTTAA GTGGGTCGTA GCCATCGCCC TCGCGCTCGG GGCCGTGGCC 
GGGTTCTACG TCTTCGGTGA CGAGCCGCTC CTCTACCGCG TTGCCGGTCT GTTGGCCGTT 
GTCGGCGTCG CCGTCGCCGT CCTCGCTACC ACTGCACAGG GGCGCAGCGT CTGGTCGTTC 
GCCCAGGGCG CCAAGCAGGA GGTGCGCAAG GTCGTCTGGC CCACCCGGCA GGAGACCCTG 
CAAACGACGC TGATTGTTGC CGCGGTGGTG ATTATTGTGG CCATCTTCCT CTGGCTGATG 
GACCTGCTGC TGCTTTGGCT GGTCGGCATG ATCACCGGCC ACGGAGGCTG A 

 

Protein sequence

MARRTASVAG SMKSKAETAK SPLDVVKWVV AIALALGAVA GFYVFGDEPL LYRVAGLLAV 
VGVAVAVLAT TAQGRSVWSF AQGAKQEVRK VVWPTRQETL QTTLIVAAVV IIVAIFLWLM 
DLLLLWLVGM ITGHGG