| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0863 |
|---|
| Symbol | rpsL |
|---|
| ID | 4709607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 931696 |
|---|
| End bp | 932073 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639855322 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001002441 |
|---|
| Protein GI | 121997654 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAG TGAACCAGTT GGTGCGCAAA GGTCGCACCA AGCGCACCGC GAAGAGCAGT
GTGCCGGCGC TGGAGGCGTG CCCTCAGAAG CGCGGCGTAT GCACTCGCGT CTACACCACC
ACGCCGAAGA AGCCGAACTC CGCTCTGCGT AAGGTGGCGC GTGTGCGTCT GACCAACAGT
TACGAGGTGG CCTCCTACAT CGGTGGTGAG GGACACAACC TCCAGGAGCA CTCGGTCGTC
CTCATTCGTG GCGGGCGTGT CAAGGACCTG CCTGGTGTGC GCTACCACGT CGTCCGCGGT
GCTGCGGATA CGGCGGGTGT CGACAAGCGC CGGCAGGGTC GTTCCAAGTA CGGCGCCAAG
CGCCCGAAGA AGAAGTAA
|
|---|
| Protein sequence | MATVNQLVRK GRTKRTAKSS VPALEACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNS
YEVASYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHVVRG AADTAGVDKR RQGRSKYGAK
RPKKK
|
|---|
| |