| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0852 |
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| Symbol | rpsC |
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| ID | 4709667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 923579 |
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| End bp | 924265 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639855311 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001002430 |
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| Protein GI | 121997643 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAATA AGACCCATCC CACAGGGTTT AGGCTGGGCG TCACTGAAGA CTGGCGTTCC
ATGTGGTACG CCGATAGCTC GAACTTCGGC AAGTACCTCA ACACCGACCT GGAGGTGCGG
GAGTTCATTC GTGAGCGCCT GAAGAACGCC TCCGTGAGTC GCATCCAGAT CGAGCGCCCG
GCGAAGAACG CCCTGGTCAC GATCCACACC GCCCGCCCGG GCATCGTGAT CGGCAAGAAG
GGTGAAGACA TCGATCGGCT TCGCGGTGAG GTGGCGGCCC GGATGGGGGT GCCGGTACAC
ATCAACATCG AGGAGATCCG CAAGCCGGAG GCCGACAGCA AGCTCGTGGC GGAAAGCATT
GCCGGGCAGC TGGAGCGGCG TGTGATGTTC CGGCGGGCCC TGAAGCGGGC CGTCGGCAAC
GCCCAGCGCG TCGGTGCCCA GGGGATCAAG GTGCAGGTCT CGGGCCGGCT TAACGGCTCG
GAGATCGCCC GGACCGAGTG GTATCGCGAG GGCCGCGTGC CGCTGCACAC CCTGCGTGCG
GACATCGACT ACGGCTTCGC CGAGGCGAAG ACCACGTACG GTGTGATCGG TGTGAAGGTC
TGGATCTTCA AGGGCGAGAT CATCGACACC GAAAACGAAG GGGCCCCCGC CGAGCGCGTC
AAGCGCGCCG CGGCTGCCCA GGGCTGA
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| Protein sequence | MGNKTHPTGF RLGVTEDWRS MWYADSSNFG KYLNTDLEVR EFIRERLKNA SVSRIQIERP
AKNALVTIHT ARPGIVIGKK GEDIDRLRGE VAARMGVPVH INIEEIRKPE ADSKLVAESI
AGQLERRVMF RRALKRAVGN AQRVGAQGIK VQVSGRLNGS EIARTEWYRE GRVPLHTLRA
DIDYGFAEAK TTYGVIGVKV WIFKGEIIDT ENEGAPAERV KRAAAAQG
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