| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0846 |
|---|
| Symbol | rplE |
|---|
| ID | 4710793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 921381 |
|---|
| End bp | 921920 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639855305 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_001002424 |
|---|
| Protein GI | 121997637 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.85914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGT TGCGAAAGGT TTATCGGGAA GAGGTCACCC CGGCCCTCAA AGAGCGCTTC
GGGTACCAGA ACGTCATGCA GGTGCCCCAG CTGCAGAAGA TCGTCATCAA CATGGGTCTG
GGTGAGGCCA CCAAGGACAA GAAGATCCTG GAGGCCGCGC AGGAGGATCT GGCCAAGATC
GCCGGGCAGA AGCCAGTGGT GACCCGCGCT CGCAAGTCGG TGGCCGGGTT CAAGATCCGT
GAGGGCTGGC CAATCGGCTG CAAGGTGACG CTGCGCCGCG ATCGGATGTA CGAGTTCCTC
GAGCGCTTCA TCCACGTGGC CTCCCCGCGG GTCCGCGACT TCCGTGGGTT CTCGCCGCGG
TCGTTCGACG GGCGGGGCAA CTACAACCTC GGTATCCGGG AGCAACTGAT CTTCCCGGAG
ATCGACTACG ACGAAATCGA TCGGGTGCGC GGCATGGACA TCACCGTGTC CACCACCGCT
CGCACCGACG CGGAAGGGAA GGCCCTGCTC GAAGGGTTCG GCTTTCCCTT CCGGACCTGA
|
|---|
| Protein sequence | MATLRKVYRE EVTPALKERF GYQNVMQVPQ LQKIVINMGL GEATKDKKIL EAAQEDLAKI
AGQKPVVTRA RKSVAGFKIR EGWPIGCKVT LRRDRMYEFL ERFIHVASPR VRDFRGFSPR
SFDGRGNYNL GIREQLIFPE IDYDEIDRVR GMDITVSTTA RTDAEGKALL EGFGFPFRT
|
|---|
| |