| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0844 |
|---|
| Symbol | rpsH |
|---|
| ID | 4710957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 920648 |
|---|
| End bp | 921043 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639855303 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001002422 |
|---|
| Protein GI | 121997635 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.513324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA CCGATCCCAT TGCCGACATG CTGACCCGGG TACGGAACGC GCACCACGCC
GAGAAGGCGG ACGTGCGTAT GCCGTCCTCG AAGCTCAAGC GGGCGATTGC CGCCGTCCTC
CAGGAGGAGG GCTACATCGA GGGTTACCGC GAGGTCGGGG AAGAGAAGAA GCCGGTCCTG
GAGGTCACGC TCCGGTACCA CGAGGGTCAG CCGGCAATCC GCGAAATCCA GCGTTACAGC
CGGCCGGGTC TGCGGGTTTA CCGCGGTCGT GACGAGCTGC CGCGCGTGCG CAACGGGCTG
GGCACCGCCA TCATCTCCAC GTCCAAGGGC GTGATGAGCG ATGGCCAGGC CCGCGCGCAG
GGGCACGGTG GCGAGGTACT CTGCTGGGTC TTCTAG
|
|---|
| Protein sequence | MSMTDPIADM LTRVRNAHHA EKADVRMPSS KLKRAIAAVL QEEGYIEGYR EVGEEKKPVL
EVTLRYHEGQ PAIREIQRYS RPGLRVYRGR DELPRVRNGL GTAIISTSKG VMSDGQARAQ
GHGGEVLCWV F
|
|---|
| |