Gene Hhal_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0834 
Symbol 
ID4711403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp915473 
End bp916096 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID639855293 
Productribosomal protein S4 
Protein accessionYP_001002412 
Protein GI121997625 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGT ATATTGGTCC CAAGTGCAAA CTGGCGCGCC GCGAGAAAAC CGACCTGTTC 
CTGAAGAGCG GCGTCCGGTC GATCGACACC AAGTGCAAGC TCGAGCAGCC CCCGGGGCAG
CACGGGCAGC GCCGCGGCGG CCGCATGTCC GACTACGGCC TGCAGCTGCG CGAGAAGCAG
AAGGTGCGCC GCATGTACGG CATCATGGAG CGGCAGTTCC GTAATTACTA CAAGGAAGCC
GCCCGCCGTA AGGCCGCCAC CGGCACCGCG CTGCTGCAGC TGCTCGAGAG CCGCCTGGAT
AACGTCTGCT ACCGGATGGG CTTTGGCAGC ACCCGCGCCG AGGCACGGCA GCTGGTCAAT
CACCGCGGCG TCCTGGTCAA CGGCCGGGTG GTGAACATCC CGTCGTACCA GGTGCAGCCG
GGCGACACCG TCTCCGTCAA GGAGAAGGCC AAGAGCCAGC TGCGCATCCA GGCCGCCCTG
GAGCTGGCGC AGCAGAACGG CTGGGCCTCC TGGGTCGATG TCGACGCCAC CAAGATGGAA
GGCGTCTTCA AGCAGGCCCC GGACCGCGCC GATCTGTCGC AAGAAATCAA CGAATCGCTG
ATCGTCGAGC TGTACTCGAA GTAA
 
Protein sequence
MAKYIGPKCK LARREKTDLF LKSGVRSIDT KCKLEQPPGQ HGQRRGGRMS DYGLQLREKQ 
KVRRMYGIME RQFRNYYKEA ARRKAATGTA LLQLLESRLD NVCYRMGFGS TRAEARQLVN
HRGVLVNGRV VNIPSYQVQP GDTVSVKEKA KSQLRIQAAL ELAQQNGWAS WVDVDATKME
GVFKQAPDRA DLSQEINESL IVELYSK