Gene Hhal_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0792 
Symbol 
ID4710002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp875566 
End bp876033 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content62% 
IMG OID639855251 
Productnucleic acid binding protein 
Protein accessionYP_001002370 
Protein GI121997583 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.705991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCG TGCTCGACAC CAATGTCGTC TCCGAGGTGA TGCGCCCGCA TCCAGAATCG 
GCAGTGATCG AGTGGCTGAA TAGCACCGAT GGCAAATCAT TATACGTAAG CACGATCACC
ATCGCCGAGA TCGAGTACGG CCTTCACGCC ATGCCCGAGG GACAGCGTCG CGAAGACCTT
CGCGCACGCT TTGAGACCTT TATCCACACG GCCTTTGCGC AGCGCGTTCT CGGGTTCGAT
GAACCGTCTG CTCGCCACTA CGGGCGCATA ATGGCGGCTC GACGCCAAGA GGGCCGGCCC
CTGTCGGCGC CGGATGGGCA CCGCAGGCCG CAACGAGCCG GAGCGGGCTT GGACATCAAT
AGTGATAGCG GAGCTGCGCG ATCAAGAGCC CGTCGTCCCC GACTTTGTAC ACCATCCGGT
ACTCCTCATC GATCCGGCGA GACCAGTAGC CGGCAAGGCC GTGCTTGA
 
Protein sequence
MTIVLDTNVV SEVMRPHPES AVIEWLNSTD GKSLYVSTIT IAEIEYGLHA MPEGQRREDL 
RARFETFIHT AFAQRVLGFD EPSARHYGRI MAARRQEGRP LSAPDGHRRP QRAGAGLDIN
SDSGAARSRA RRPRLCTPSG TPHRSGETSS RQGRA